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S5_scaffold_334_curated

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_334_curated_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..475)
DNA (474bp) protein (158aa)
gamma-glutamyltranspeptidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A38A3
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61460.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
tyramine oxidase
S5_scaffold_334_curated_2
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(472..1563)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000362AF3B
Uncharacterized protein {ECO:0000313|EMBL:KJC63083.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
class V aminotransferase
S5_scaffold_334_curated_3
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1560..2849)
DNA (1290bp) protein (430aa)
Cysteine desulfurase n=1 Tax=Patulibacter medicamentivorans RepID=H0E320_9ACTN rbh
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62201.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
class V aminotransferase rbh
S5_scaffold_334_curated_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3060..4004)
DNA (945bp) protein (315aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAP2_MICTS rbh
ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase rbh
S5_scaffold_334_curated_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4001..5065)
DNA (1065bp) protein (355aa)
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365C77F rbh
Aldo-keto reductase {ECO:0000313|EMBL:CDK01059.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
oxidoreductase rbh
S5_scaffold_334_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5062..5250)
DNA (189bp) protein (63aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
16S rRNA methyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036D0D31
S5_scaffold_334_curated_7
unknown

Not on your lists

5533..6012
DNA (480bp) protein (160aa)

This feature has no annotations

S5_scaffold_334_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6177..8450
DNA (2274bp) protein (758aa)
glycosyl transferase family 2 n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B2EE16 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDK01061.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
family 2 glycosyl transferase rbh
S5_scaffold_334_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8447..9184
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034B1125
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:CDK01062.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
biotin/lipoyl attachment domain-containing protein
S5_scaffold_334_curated_10
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9229..11238
DNA (2010bp) protein (670aa)
endo-1,3-beta-glucanase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B46298 rbh
glycoside hydrolase family 81 rbh
Glycoside hydrolase family 81 {ECO:0000313|EMBL:AEE47566.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
S5_scaffold_334_curated_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11278..12753
DNA (1476bp) protein (492aa)
major facilitator transporter n=1 Tax=Microbacterium sp. B19 RepID=UPI000347EACE rbh
Glucose transport protein {ECO:0000313|EMBL:CDJ99702.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
permease of the major facilitator superfamily rbh
S5_scaffold_334_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12755..13633)
DNA (879bp) protein (293aa)
Mg-dependent DNase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YIG5_9MICO rbh
Mg-dependent DNase {ECO:0000313|EMBL:CDJ99703.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Mg-dependent DNase rbh
S5_scaffold_334_curated_13
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(13731..15308)
DNA (1578bp) protein (526aa)
methionyl-tRNA synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003756AC2 rbh
metG; methionyl-tRNA synthetase rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
S5_scaffold_334_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15382..15984)
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK00696.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_334_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15995..16816)
DNA (822bp) protein (274aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAM8_MICTS rbh
methyltransferase rbh
S5_scaffold_334_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16984..18654
DNA (1671bp) protein (557aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DF58A0 rbh
Dolichyl-phosphate-mannose--protein O-mannosyl transferase {ECO:0000313|EMBL:CDK00694.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
dolichyl-phosphate-mannose--protein O-mannosyl transferase rbh
S5_scaffold_334_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18686..20569)
DNA (1884bp) protein (628aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000372F671 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK00691.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
highly conserved protein containing a thioredoxin domain rbh
S5_scaffold_334_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20755..21591)
DNA (837bp) protein (279aa)
2,5-diketo-D-gluconic acid reductase A {ECO:0000313|EMBL:CDK00690.1}; EC=1.1.1.274 {ECO:0000313|EMBL:CDK00690.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
2,5-diketo-D-gluconic acid reductase A n=1 Tax=Corynebacterium sp. (strain ATCC 31090) RepID=DKGA_CORSC rbh
aldo/keto reductase rbh
S5_scaffold_334_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21738..23093)
DNA (1356bp) protein (452aa)
Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana CCMP526 RepID=K8Z4N6_9STRA
Uncharacterized protein {ECO:0000313|EMBL:CDK00689.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_334_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23175..27257
DNA (4083bp) protein (1361aa)
ATP-dependent RNA helicase HrpA {ECO:0000313|EMBL:CDK00688.1}; EC=3.6.4.13 {ECO:0000313|EMBL:CDK00688.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ATP-dependent helicase HrpA n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7B8_9MICO rbh
ATP-dependent helicase rbh
S5_scaffold_334_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27425..28366
DNA (942bp) protein (314aa)
NADPH:quinone reductase {ECO:0000313|EMBL:CDK00687.1}; EC=1.6.5.5 {ECO:0000313|EMBL:CDK00687.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030CC7AB rbh
oxidoreductase
S5_scaffold_334_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28371..28895)
DNA (525bp) protein (175aa)
sseB; putative thiosulfate sulfurtransferase (EC:2.8.1.1)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036EFD2C
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_334_curated_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29333..30316
DNA (984bp) protein (328aa)
1,5-anhydro-D-fructose reductase {ECO:0000313|EMBL:KJL35069.1}; EC=1.1.1.292 {ECO:0000313|EMBL:KJL35069.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FBA5D rbh
dehydrogenase rbh
S5_scaffold_334_curated_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30318..31193
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7B5_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99286.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_334_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31195..31608)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D71AAD
Uncharacterized protein {ECO:0000313|EMBL:CDJ99287.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DoxX protein
S5_scaffold_334_curated_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31663..32685)
DNA (1023bp) protein (341aa)
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:CDJ99288.1}; EC=3.5.99.7 {ECO:0000313|EMBL:CDJ99288.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YIC9_9MICO rbh
S5_scaffold_334_curated_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32768..33814)
DNA (1047bp) protein (349aa)
Bicupin, oxalate decarboxylase family {ECO:0000313|EMBL:CDJ99289.1}; EC=4.1.1.2 {ECO:0000313|EMBL:CDJ99289.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
thermophilic glucose-6-phosphate isomerase-like enzyme; K01569 oxalate decarboxylase [EC:4.1.1.2] id=7719440 bin=CNBR_ACT species=Mycobacterium rhodesiae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
putative sugar transport protein rbh
S5_scaffold_334_curated_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33811..34224)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003770FB5
Uncharacterized protein {ECO:0000313|EMBL:CDJ99290.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_334_curated_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34370..34987)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BSG1_XYLCX rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99291.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_334_curated_30
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35087..37651)
DNA (2565bp) protein (855aa)
ATPase AAA n=1 Tax=Microbacterium yannicii RepID=UPI0002D36060 rbh
Chaperone protein ClpB {ECO:0000313|EMBL:CDJ99292.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ATPase with chaperone activity, ATP-binding subunit rbh
Displaying items 1-30 of 48 in total

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