ggKbase home page

S7_scaffold_163_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_163_curated_1
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145..666)
DNA (522bp) protein (174aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002376956 rbh
ompA/MotB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

779..1372
DNA (594bp) protein (198aa)
Chac family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ20_9BURK rbh
chac family protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1472..1996
DNA (525bp) protein (175aa)
superoxide dismutase n=1 Tax=Acidovorax radicis RepID=UPI0002376958 rbh
superoxide dismutase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2092..2631)
DNA (540bp) protein (180aa)
Putative MobA-like protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EKZ3_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_163_curated_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2762..3529)
DNA (768bp) protein (256aa)
oxidoreductase n=1 Tax=Acidovorax radicis RepID=UPI000237695A rbh
oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3632..4528
DNA (897bp) protein (299aa)
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI000237695B rbh
Transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_7
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5488..5697
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VT73_POLNA
Uncharacterized protein {ECO:0000313|EMBL:KJA09574.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
S7_scaffold_163_curated_8
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5966..7972)
DNA (2007bp) protein (669aa)
UPI0003D01769 related cluster n=1 Tax=unknown RepID=UPI0003D01769 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG07584.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
S7_scaffold_163_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8485..10755)
DNA (2271bp) protein (757aa)
Isoquinoline 1-oxidoreductase subunit beta n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1E9_9BURK rbh
isoquinoline 1-oxidoreductase subunit beta rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_163_curated_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10778..11314)
DNA (537bp) protein (179aa)
(2Fe-2S)-binding protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3P2_9BURK rbh
isoquinoline 1-oxidoreductase subunit alpha rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_163_curated_11
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11415..11987)
DNA (573bp) protein (191aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI000237695E rbh
TetR family transcriptional regulator rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_163_curated_12
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12137..12775
DNA (639bp) protein (213aa)
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Acidovorax radicis RepID=UPI000237695F rbh
pyridoxamine 5'-phosphate oxidase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12909..13244
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAB8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU46081.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S7_scaffold_163_curated_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13332..13727
DNA (396bp) protein (132aa)
glyoxalase n=1 Tax=Acidovorax radicis RepID=UPI0002376960
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_163_curated_15
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14754..15047
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376962
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_163_curated_16
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15170..16171
DNA (1002bp) protein (334aa)
NADPH:quinone oxidoreductase n=1 Tax=Acidovorax radicis RepID=UPI0002376963 rbh
zinc-binding alcohol dehydrogenase rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_163_curated_17
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16287..16991
DNA (705bp) protein (235aa)
short-chain dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002376964 rbh
short chain dehydrogenase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_163_curated_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17143..18012
DNA (870bp) protein (290aa)
Beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24)
peroxidase (Non-Heme peroxidase) n=1 Tax=Acidovorax radicis RepID=UPI0002376965 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18063..19085)
DNA (1023bp) protein (341aa)
Auxin efflux carrier n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3P4_9BURK rbh
auxin efflux carrier rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_163_curated_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19219..20313)
DNA (1095bp) protein (365aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237696B rbh
ABC transporter rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_163_curated_21
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20481..21875)
DNA (1395bp) protein (465aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI000237696C rbh
integral membrane sensor signal transduction histidine kinase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_163_curated_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21872..22588)
DNA (717bp) protein (239aa)
chemotaxis protein CheY n=1 Tax=Acidovorax radicis RepID=UPI000237696D rbh
two component transcriptional regulator rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_163_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22721..23227)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI000237696E
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23719..23928
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EFJ8_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_163_curated_25
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24052..24402
DNA (351bp) protein (117aa)
RNP-1 like RNA-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I8C1_9BURK
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24517..25554)
DNA (1038bp) protein (346aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002376974 rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_27
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25551..26138)
DNA (588bp) protein (196aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002376974
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_163_curated_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26310..28511)
DNA (2202bp) protein (734aa)
TonB-denpendent receptor n=1 Tax=Acidovorax radicis RepID=UPI0002376975 rbh
TonB-dependent receptor rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_163_curated_29
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28725..29207)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376976
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_163_curated_30
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29253..29945)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376977 rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying items 1-30 of 51 in total

View Taxonomy