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S7_scaffold_134_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_134_curated_1
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..4203
DNA (4203bp) protein (1401aa)
Carbohydrate binding protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW89_9BURK rbh
carbohydrate binding protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4411..5070
DNA (660bp) protein (220aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375FC9 rbh
CRP/FNR family transcriptional regulator rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5356..6057
DNA (702bp) protein (234aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375FC8 rbh
cyclic nucleotide-binding domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_4
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6135..6752)
DNA (618bp) protein (206aa)
transporter n=1 Tax=Acidovorax radicis RepID=UPI0002375FC7 rbh
transport-associated protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_5
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6885..7745)
DNA (861bp) protein (287aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002375FC6 rbh
diguanylate cyclase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7979..10543
DNA (2565bp) protein (855aa)
methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] id=5080545 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10587..11186
DNA (600bp) protein (200aa)
hypothetical protein id=5080544 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_8
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11430..12149)
DNA (720bp) protein (240aa)
Crp/FNR family transcriptional regulator id=12551476 bin=BDI species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
CarD family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13600..13914
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XKE3_VARPD
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14128..15150
DNA (1023bp) protein (341aa)
deoxyribodipyrimidine photolyase n=1 Tax=Acidovorax radicis RepID=UPI0002375FC5 rbh
diguanylate cyclase domain-containing protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15250..16452
DNA (1203bp) protein (401aa)
major facilitator transporter n=1 Tax=Acidovorax radicis RepID=UPI0002375C7B rbh
Bcr/CflA subfamily drug resistance transporter rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_12
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16627..17583)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375C71 rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17776..18186)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWA0_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_134_curated_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18349..20718
DNA (2370bp) protein (790aa)
RNA-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002375C6E rbh
RNA-binding S1 domain-containing protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_15
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20800..21627
DNA (828bp) protein (276aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002375C6D rbh
signal transduction protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21672..22877
DNA (1206bp) protein (402aa)
phospholipase n=1 Tax=Acidovorax radicis RepID=UPI0002375C6C rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_17
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22881..24722)
DNA (1842bp) protein (614aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002375C6B rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_18
unknown

Not on your lists

25216..25611
DNA (396bp) protein (132aa)

This feature has no annotations

S7_scaffold_134_curated_19
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25975..27111)
DNA (1137bp) protein (379aa)
4-hydroxybutyrate dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI0002375C6A rbh
iron-containing alcohol dehydrogenase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27209..28078
DNA (870bp) protein (290aa)
Hydratase/decarboxylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HS69_9BURK rbh
hydratase/decarboxylase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_134_curated_21
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28183..29103
DNA (921bp) protein (307aa)
Alpha/beta hydrolase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3S1_9BURK rbh
alpha/beta hydrolase domain-containing protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_22
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29057..29968
DNA (912bp) protein (304aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Acidovorax radicis RepID=UPI0002375C67 rbh
N-acetyltransferase GCN5 rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30034..30942)
DNA (909bp) protein (303aa)
Glycine cleavage T protein (Aminomethyl transferase) n=1 Tax=Acidovorax sp. KKS102 RepID=K0I9S1_9BURK rbh
glycine cleavage T protein (aminomethyl transferase) rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_24
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30952..31974
DNA (1023bp) protein (341aa)
aminodeoxychorismate lyase n=1 Tax=Acidovorax radicis RepID=UPI0002375C65 rbh
aminodeoxychorismate lyase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_25
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31995..32672
DNA (678bp) protein (226aa)
thymidylate kinase n=1 Tax=Acidovorax radicis RepID=UPI0002375C64 rbh
thymidylate kinase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_134_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32669..33679
DNA (1011bp) protein (337aa)
DNA-directed DNA polymerase n=1 Tax=Acidovorax radicis RepID=UPI0002375C63 rbh
DNA-directed DNA polymerase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33733..34056
DNA (324bp) protein (108aa)
pilus assembly protein PilZ n=1 Tax=Acidovorax radicis RepID=UPI0002375C62
type IV pilus assembly pilz
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_134_curated_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34211..35017
DNA (807bp) protein (269aa)
DNAase n=1 Tax=Acidovorax radicis RepID=UPI0002375C61 rbh
TatD family hydrolase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_134_curated_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35014..35688
DNA (675bp) protein (225aa)
ankyrin n=1 Tax=Acidovorax radicis RepID=UPI0002375C60 rbh
ankyrin rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_134_curated_30
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35753..37558)
DNA (1806bp) protein (602aa)
ATP-binding protein n=1 Tax=Acidovorax radicis RepID=UPI0002375C5F rbh
lipid A ABC transporter ATPase/inner membrane protein MsbA rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying items 1-30 of 50 in total

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