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S7_scaffold_12_curated

Search features with annotation key words

Displaying items 1-30 of 274 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_12_curated_1
unknown

Not on your lists

3..80
DNA (78bp) protein (26aa)

This feature has no annotations

S7_scaffold_12_curated_2
unknown

Not on your lists

264..674
DNA (411bp) protein (137aa)
Helix-turn-helix domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P585_9BACT
S7_scaffold_12_curated_3
unknown

Not on your lists

811..924
DNA (114bp) protein (38aa)

This feature has no annotations

S7_scaffold_12_curated_4
unknown

Not on your lists

974..1165
DNA (192bp) protein (64aa)

This feature has no annotations

S7_scaffold_12_curated_5
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(1185..4325)
DNA (3141bp) protein (1047aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y4Y5_SORCE
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
S7_scaffold_12_curated_6
RLO_PLX_64_10, Bacteria

Not on your lists

comp(4460..5158)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034BBF7C
Pirin domain protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S7_scaffold_12_curated_7
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5303..5740
DNA (438bp) protein (146aa)
Universal stress protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYM8_9BACT
uspa domain-containing protein
Tax=RBG_16_Ignavibacteria_35_7_curated
S7_scaffold_12_curated_8
unknown

Not on your lists

comp(5748..6731)
DNA (984bp) protein (328aa)

This feature has no annotations

S7_scaffold_12_curated_9
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6819..7829)
DNA (1011bp) protein (337aa)
Patatin n=1 Tax=Thermincola potens (strain JR) RepID=D5X9C5_THEPJ rbh
patatin rbh
Patatin {ECO:0000313|EMBL:ADG83029.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
S7_scaffold_12_curated_10
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8012..9445
DNA (1434bp) protein (478aa)
hypothetical protein id=12497414 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWC2_Pelobacteraceae_58_13_curated
S7_scaffold_12_curated_11
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

9930..12110
DNA (2181bp) protein (727aa)
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYY6_9BACT rbh
NADH dehydrogenase rbh
Tax=GWF2_Planctomycetes_50_10_curated
S7_scaffold_12_curated_12
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

12147..13913
DNA (1767bp) protein (589aa)
NAD(P)-dependent iron-only hydrogenase catalytic subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYY7_9BACT rbh
NuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase subunit G rbh
Tax=GWF2_Planctomycetes_50_10_curated
S7_scaffold_12_curated_13
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

13910..14473
DNA (564bp) protein (188aa)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYY8_9BACT
hydrogenase
Tax=GWF2_Planctomycetes_50_10_curated
S7_scaffold_12_curated_14
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14624..15298
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYR0_9BACT
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
S7_scaffold_12_curated_15
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15318..16127)
DNA (810bp) protein (270aa)
Endonuclease/exonuclease/phosphatase domain protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08RQ3_STIAD rbh
endonuclease/exonuclease/phosphatase domain-containing protein rbh
Endonuclease/exonuclease/phosphatase domain protein {ECO:0000313|EMBL:ADO72044.1}; Endonuclease/exonuclease/phosphatase family {ECO:0000313|EMBL:EAU63158.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
S7_scaffold_12_curated_16
unknown

Not on your lists

comp(16486..16923)
DNA (438bp) protein (146aa)

This feature has no annotations

S7_scaffold_12_curated_17
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17176..17817)
DNA (642bp) protein (214aa)
NLP/P60 protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1F1_9BACT
cell wall-associated hydrolase
Tax=BJP_IG2102_Syntrophobacterales_60_12
S7_scaffold_12_curated_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17992..19680
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0K4_9BACT rbh
putative mucoidy inhibitor A
Putative mucoidy inhibitor A {ECO:0000313|EMBL:ABS26522.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
S7_scaffold_12_curated_19
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

19781..20545
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0K6_9BACT rbh
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
S7_scaffold_12_curated_20
unknown

Not on your lists

20548..21348
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0K7_9BACT
S7_scaffold_12_curated_21
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

21419..22375
DNA (957bp) protein (319aa)
von Willebrand factor type A n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0K8_9BACT rbh
von Willebrand factor type A domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
S7_scaffold_12_curated_22
unknown

Not on your lists

22383..23876
DNA (1494bp) protein (498aa)
von Willebrand factor type A n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0K9_9BACT rbh
S7_scaffold_12_curated_23
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23892..24296)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0L2_9BACT
PF03190 family protein {ECO:0000313|EMBL:EMY77740.1}; TaxID=1218598 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii serovar Ranarum str. ICFT.;"
thioredoxin domain-containing protein
S7_scaffold_12_curated_24
unknown

Not on your lists

24478..24831
DNA (354bp) protein (118aa)

This feature has no annotations

S7_scaffold_12_curated_25
Thermus sp. RL, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

24895..25296
DNA (402bp) protein (134aa)
Thioesterase superfamily n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0L5_9BACT
4-hydroxybenzoyl-CoA thioesterase
Thioesterase {ECO:0000313|EMBL:EIA39879.1}; TaxID=456163 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. RL.;"
S7_scaffold_12_curated_26
unknown

Not on your lists

comp(25298..25942)
DNA (645bp) protein (215aa)

This feature has no annotations

S7_scaffold_12_curated_27
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

26006..27457
DNA (1452bp) protein (484aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16) rbh
Cysteine--tRNA ligase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0L6_9BACT rbh
S7_scaffold_12_curated_28
unknown

Not on your lists

27493..27894
DNA (402bp) protein (134aa)

This feature has no annotations

S7_scaffold_12_curated_29
CG_Mariprof_02, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28206..29780)
DNA (1575bp) protein (525aa)
Sensor histidine kinase response regulator, DUF3365, PAS, PAS, GAF and PAS domain-containing, heme-binding n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ECP7_GEOBB rbh
GAF/PAS/PAC domain-containing heme-binding site rbh
Tax=CG_Mariprof_02
S7_scaffold_12_curated_30
unknown

Not on your lists

comp(29777..29929)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying items 1-30 of 274 in total

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