name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S7_scaffold_258_curated_1
R_RIF_OD1_04_46_16, RIF-OD1-4, Parcubacteria, Bacteria
|
Not on your lists |
104..2257
|
DNA methylase N-4/N-6 domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P588_9BACT
rbh
DNA methylase N-4/N-6 domain-containing protein
rbh
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_04_46_16_curated
|
|
S7_scaffold_258_curated_2
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(2429..2818)
|
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P589_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMI25863.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
hypothetical protein
|
|
S7_scaffold_258_curated_3
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria
|
Not on your lists |
3050..6007
|
Helicase domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P590_9BACT
rbh
DNA/RNA helicase
rbh
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
|
|
S7_scaffold_258_curated_4
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6163..8115
|
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SCP4_9HELI
rbh
hypothetical protein
rbh
Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
|
|
S7_scaffold_258_curated_5
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(8119..9534)
|
AAA ATPase central domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZG4_9BACT
rbh
recombination factor protein RarA
rbh
ATPase, AAA family {ECO:0000313|EMBL:ABB14003.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
|
|
S7_scaffold_258_curated_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9914..10249)
|
hypothetical protein n=1 Tax=Vibrio tasmaniensis RepID=UPI0002D313D5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
|
|
S7_scaffold_258_curated_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(10290..10685)
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DCA8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY15938.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
|
|
S7_scaffold_258_curated_8
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10690..10986)
|
Putative uncharacterized protein id=4791442 bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
|
|
S7_scaffold_258_curated_9
Leptothrix ochracea, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11012..11425
|
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P352_9BACT
Cation/cationic drug transporter {ECO:0000313|EMBL:EIM31375.1}; Flags: Precursor;; TaxID=735332 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix ochracea L12.;"
hypothetical protein
|
|
S7_scaffold_258_curated_10
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11530..12657
|
Response regulator receiver n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P351_9BACT
rbh
response regulator containing a CheY-like receiver domain and an HD-GYP domain
rbh
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:AFM25791.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
|
|
S7_scaffold_258_curated_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria
|
Not on your lists |
12767..14980
|
Probable butyrate kinase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P350_9BACT
rbh
phosphate acetyltransferase
rbh
Tax=RBG_13_Acidobacteria_68_16_curated
|
|
S7_scaffold_258_curated_12
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15057..16886
|
MscS Mechanosensitive ion channel n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P093_9BACT
rbh
Putative MscS family protein {ECO:0000313|EMBL:GAO03560.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
LigA
rbh
|
|
S7_scaffold_258_curated_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16953..17171)
|
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y5V6_THIV6
hypothetical protein
Tax=CG_Rhodof_02
|
|
S7_scaffold_258_curated_14
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17366..18376)
|
Phosphotransacetylase {ECO:0000313|EMBL:ABK98910.1}; EC=2.3.1.8 {ECO:0000313|EMBL:ABK98910.1};; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
Phosphotransacetylase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P347_9BACT
rbh
phosphate acetyltransferase
rbh
|
|
S7_scaffold_258_curated_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18644..19273)
|
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri TS44.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZF7_9BACT
16S rRNA methyltransferase
|
|
S7_scaffold_258_curated_16
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(19384..19905)
|
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KFG1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH02864.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
|
|
S7_scaffold_258_curated_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria
|
Not on your lists |
comp(19902..20264)
|
Regulator of competence-specific genes id=3788263 bin=GWC2_Nitrospirae_57_13 species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
competence-specific genes regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
|
|
S7_scaffold_258_curated_18
unknown
|
Not on your lists |
20354..21100
|
Helix-turn-helix Fis-type n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1D2_9BACT
|
|
S7_scaffold_258_curated_19
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21139..22647
|
Sigma-54 factor interaction domain-containing protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1D1_9BACT
rbh
Sigma-54 dependent response regulator {ECO:0000313|EMBL:ENO74897.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
Fis family transcriptional regulator
rbh
|
|
S7_scaffold_258_curated_20
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22651..23595)
|
Ribonuclease BN n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1D0_9BACT
rbh
ribonuclease BN
Tax=RBG_13_Deltaproteobacteria_53_10_curated
|
|
S7_scaffold_258_curated_21
unknown
|
Not on your lists |
comp(23602..23802)
|
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1C9_9BACT
|
|
S7_scaffold_258_curated_22
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23815..24432)
|
NUDIX hydrolase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZX8_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:KKB05384.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
NUDIX hydrolase
|
|
S7_scaffold_258_curated_23
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria
|
Not on your lists |
comp(24442..26667)
|
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
rbh
RelA/SpoT family protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZX9_9BACT
rbh
Tax=GWC2_Nitrospirae_57_9_curated
|
|
S7_scaffold_258_curated_24
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26723..28438)
|
2-nitropropane dioxygenase NPD n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P061_9BACT
rbh
2-nitropropane dioxygenase
rbh
Tax=CG_Delta_03
|
|
S7_scaffold_258_curated_25
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28566..29693
|
Molybdopterin cofactor biosynthesis protein n=2 Tax=Bordetella holmesii RepID=M5P1L0_9BORD
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:KCB36035.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
molybdenum cofactor synthesis domain protein
|
|
S7_scaffold_258_curated_trna_2
unknown
|
Not on your lists |
comp(29766..29855)
|
transferRNA Ser
|
|
S7_scaffold_258_curated_trna_1
unknown
|
Not on your lists |
29939..30025
|
transferRNA Ser
|
|
S7_scaffold_258_curated_26
Acinetobacter soli, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30355..31119)
|
repressor n=1 Tax=Oceanimonas smirnovii RepID=UPI000366DAA6
Uncharacterized protein {ECO:0000313|EMBL:ENV60410.1}; TaxID=1217677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter soli NIPH 2899.;"
LexA-related transcriptional regulator
|
|
S7_scaffold_258_curated_27
unknown
|
Not on your lists |
31213..31545
|
This feature has no annotations |
|
S7_scaffold_258_curated_28
unknown
|
Not on your lists |
31554..33923
|
This feature has no annotations |