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S7_scaffold_44_curated

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_44_curated_1
unknown

Not on your lists

comp(2682..2921)
DNA (240bp) protein (80aa)

This feature has no annotations

S7_scaffold_44_curated_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3954..4964
DNA (1011bp) protein (337aa)
Integron integrase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWF1_9BACT rbh
integron integrase rbh
Integron integrase {ECO:0000313|EMBL:AAZ97168.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
S7_scaffold_44_curated_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

5834..6760
DNA (927bp) protein (309aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
tRNA-dihydrouridine synthase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZ29_9BACT rbh
nifR3 family TIM-barrel protein
S7_scaffold_44_curated_4
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(7029..8330)
DNA (1302bp) protein (434aa)
ATP-binding region ATPase domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZB7_9BACT rbh
GAF sensor signal transduction histidine kinase
Tax=GWF2_Lentisphaerae_57_35_curated
S7_scaffold_44_curated_5
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8414..10339)
DNA (1926bp) protein (642aa)
Hydrogenase, Fe-only n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZB8_9BACT rbh
Fe-only hydrogenase, catalytic subunit alpha rbh
Fe-only hydrogenase, catalytic subunit alpha {ECO:0000313|EMBL:AFN75718.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
S7_scaffold_44_curated_6
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(10355..11536)
DNA (1182bp) protein (394aa)
Hydrogen dehydrogenase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZB9_9BACT rbh
NAD-reducing hydrogenase diaphorase moiety largesubunit rbh
Tax=GWC2_ACD39_50_8_curated
S7_scaffold_44_curated_7
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11533..12054)
DNA (522bp) protein (174aa)
NADH dehydrogenase (Ubiquinone) 24 kDa subunit n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZC0_9BACT
Fe-only hydrogenase, fused subunits beta and gamma
Fe-only hydrogenase, fused subunits beta and gamma {ECO:0000313|EMBL:AFN75717.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
S7_scaffold_44_curated_8
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12063..12434)
DNA (372bp) protein (124aa)
Response regulator receiver n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZC1_9BACT
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AFN75716.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
S7_scaffold_44_curated_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13236..14132)
DNA (897bp) protein (299aa)
DMT superfamily drug/metabolite permease id=4013760 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
DMT superfamily drug/metabolite permease
Tax=RBG_16_Ignavibacteria_34_14_curated
S7_scaffold_44_curated_10
unknown

Not on your lists

comp(14535..16307)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0Z3_9BACT rbh
S7_scaffold_44_curated_11
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16375..17016)
DNA (642bp) protein (214aa)
Response regulator receiver n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0Z2_9BACT
Fis family transcriptional regulator
Tax=BJP_IG2069_Desfulfarculales_53_13
S7_scaffold_44_curated_12
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17237..18295)
DNA (1059bp) protein (353aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWK8_9BACT rbh
flagellar biosynthetic protein FlhB
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:AEY66564.1}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
S7_scaffold_44_curated_13
Selenomonas sputigena, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18299..19081)
DNA (783bp) protein (261aa)
Type III secretion system inner membrane R protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWK7_9BACT rbh
flagellar biosynthetic protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=546271 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28).;"
S7_scaffold_44_curated_14
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19097..19375)
DNA (279bp) protein (93aa)
Export protein FliQ family 3 n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWK6_9BACT
flagellar biosynthetic protein FliQ
Tax=BJP_IG2157_Clostridiales_35_16
S7_scaffold_44_curated_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19539..20297)
DNA (759bp) protein (253aa)
Flagellar biosynthetic protein FliP n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWK5_9BACT rbh
fliP; flagellar biogenesis protein FliP
Flagellar biogenesis protein FliP {ECO:0000313|EMBL:AAR33755.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S7_scaffold_44_curated_16
unknown

Not on your lists

comp(20294..20809)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NWK4_9BACT
S7_scaffold_44_curated_17
unknown

Not on your lists

20916..21434
DNA (519bp) protein (173aa)

This feature has no annotations

S7_scaffold_44_curated_18
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21615..22256
DNA (642bp) protein (214aa)
Nitroreductase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HK05_CYAP4
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACL46755.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
S7_scaffold_44_curated_19
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(22270..22953)
DNA (684bp) protein (228aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P484_9BACT rbh
Tax=RBG_16_Aminicenantes_66_30_curated
S7_scaffold_44_curated_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22963..24582)
DNA (1620bp) protein (540aa)
Putative secreted protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GI73_SORC5 rbh
hypothetical protein rbh
Putative secreted protein {ECO:0000313|EMBL:CAN93227.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
S7_scaffold_44_curated_21
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24709..26823
DNA (2115bp) protein (705aa)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:CDH46608.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CDH46608.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2) rbh
Methylmalonyl-CoA mutase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQR3_ROSS1 rbh
S7_scaffold_44_curated_22
bacterium UASB270, Bacteria

Not on your lists

26823..28997
DNA (2175bp) protein (725aa)
methylmalonyl-CoA mutase (EC:5.4.99.2) rbh
Methylmalonyl-CoA mutase n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WPW4_ANEAE rbh
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:GAK57507.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
S7_scaffold_44_curated_23
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

29205..30266
DNA (1062bp) protein (354aa)
LAO/AO transport system ATPase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQR5_ROSS1 rbh
arginine/ornithine transport system ATPase rbh
LAO/AO transport system ATPase {ECO:0000313|EMBL:ABQ88968.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
S7_scaffold_44_curated_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

30320..31564
DNA (1245bp) protein (415aa)
Metal dependent phosphohydrolase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXF6_9BACT
Uncharacterized domain HDIG-containing protein {ECO:0000313|EMBL:CDM64095.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator receiver protein
S7_scaffold_44_curated_25
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

31697..33724
DNA (2028bp) protein (676aa)
sensory transduction protein kinase (EC:2.7.3.-) rbh
PAS sensor protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXF4_9BACT rbh
Tax=GWF2_Lentisphaerae_52_8_curated
S7_scaffold_44_curated_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

33721..34920
DNA (1200bp) protein (400aa)
Metal dependent phosphohydrolase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXF6_9BACT rbh
Uncharacterized domain HDIG-containing protein {ECO:0000313|EMBL:CDM64095.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator receiver protein rbh
S7_scaffold_44_curated_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

34935..36086
DNA (1152bp) protein (384aa)
Response regulator receiver n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXF7_9BACT rbh
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:CDM64096.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator
S7_scaffold_44_curated_28
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

36099..37247
DNA (1149bp) protein (383aa)
Response regulator receiver n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXF8_9BACT rbh
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:CDM64096.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
response regulator
S7_scaffold_44_curated_29
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

37295..38395
DNA (1101bp) protein (367aa)
Cell cycle protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P0F9_9BACT rbh
Factor for spore cortex peptidoglycan synthesis (Stage V sporulation) {ECO:0000313|EMBL:CEO89361.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
ftsW; cell division protein FtsW
S7_scaffold_44_curated_30
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38396..39109
DNA (714bp) protein (238aa)
oxidoreductase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002DEE7BD
NAD-dependent epimerase
Oxidoreductase {ECO:0000313|EMBL:AFC27814.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
Displaying items 1-30 of 136 in total

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