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S7_scaffold_3_curated

Search features with annotation key words

Displaying items 1-30 of 415 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_3_curated_1
unknown

Not on your lists

195..644
DNA (450bp) protein (150aa)

This feature has no annotations

S7_scaffold_3_curated_2
unknown

Not on your lists

665..865
DNA (201bp) protein (67aa)

This feature has no annotations

S7_scaffold_3_curated_3
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

1151..2038
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BXD6_ANAMD
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
S7_scaffold_3_curated_4
Calditerrivibrio nitroreducens, Calditerrivibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

2081..3166
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TH73_CALNY rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADR18767.1}; Flags: Precursor;; TaxID=768670 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae.;" source="Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 /; Yu37-1).;"
S7_scaffold_3_curated_5
unknown

Not on your lists

comp(3170..3952)
DNA (783bp) protein (261aa)

This feature has no annotations

S7_scaffold_3_curated_6
unknown

Not on your lists

comp(3986..4147)
DNA (162bp) protein (54aa)

This feature has no annotations

S7_scaffold_3_curated_7
unknown

Not on your lists

4298..5215
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NYI1_9BACT
S7_scaffold_3_curated_8
unknown

Not on your lists

5241..5492
DNA (252bp) protein (84aa)

This feature has no annotations

S7_scaffold_3_curated_9
unknown

Not on your lists

comp(5509..5868)
DNA (360bp) protein (120aa)

This feature has no annotations

S7_scaffold_3_curated_10
unknown

Not on your lists

comp(5865..7040)
DNA (1176bp) protein (392aa)

This feature has no annotations

S7_scaffold_3_curated_11
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(7064..7897)
DNA (834bp) protein (278aa)
OmpA/MotB domain-containing protein id=17272354 bin=RBG_16_Aminicenantes_66_30 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
OmpA/MotB domain-containing protein
Tax=RBG_13_Aminicenantes_63_10_curated
S7_scaffold_3_curated_12
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8008..8685)
DNA (678bp) protein (226aa)
DNA repair protein RadC n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2U7_9BACT rbh
DNA repair protein radc
DNA repair protein radc {ECO:0000313|EMBL:AGA58649.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
S7_scaffold_3_curated_13
unknown

Not on your lists

comp(8685..9230)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2U8_9BACT
S7_scaffold_3_curated_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9239..9553)
DNA (315bp) protein (105aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2U9_9BACT
competence protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
S7_scaffold_3_curated_15
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9818..11044
DNA (1227bp) protein (409aa)
Metal dependent phosphohydrolase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2V0_9BACT rbh
Phosphodiesterase {ECO:0000313|EMBL:KIA80623.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
hypothetical protein rbh
S7_scaffold_3_curated_16
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(11158..12138)
DNA (981bp) protein (327aa)
cysteine synthase n=1 Tax=unclassified Aminicenantes RepID=UPI000372963C rbh
Cystathionine beta-synthase {ECO:0000313|EMBL:KDA53880.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
cystathionine beta-synthase rbh
S7_scaffold_3_curated_17
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12468..13142
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3T8_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG36277.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfotalea psychrophila (strain LSv54 / DSM 12343).;"
S7_scaffold_3_curated_18
unknown

Not on your lists

comp(13108..13335)
DNA (228bp) protein (76aa)

This feature has no annotations

S7_scaffold_3_curated_19
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13442..15241
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035E3777 rbh
adenylate/guanylate cyclase with Chase sensor
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
S7_scaffold_3_curated_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15238..16077
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000381293D
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S7_scaffold_3_curated_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists


comp(16090..17277)
DNA (1188bp) protein (396aa)
PREDICTED: alanyl-tRNA editing protein Aarsd1 n=1 Tax=Octodon degus RepID=UPI000333BA70
alanyl-tRNA synthetase
Tax=RBG_13_Acidobacteria_68_16_curated
S7_scaffold_3_curated_22
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(17307..18134)
DNA (828bp) protein (276aa)
Iron-sulfur cluster-binding protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4G8_9BACT rbh
4Fe-4S ferredoxin rbh
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
S7_scaffold_3_curated_23
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18340..20073
DNA (1734bp) protein (578aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EPR76077.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EPR76077.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
AMP-dependent synthetase and ligase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4E7_9BACT rbh
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
S7_scaffold_3_curated_24
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

20084..20857
DNA (774bp) protein (258aa)
TatD-related deoxyribonuclease n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3U7_9BACT rbh
TatD-related deoxyribonuclease
Tax=GWF2_Lentisphaerae_57_35_curated
S7_scaffold_3_curated_25
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20854..21621
DNA (768bp) protein (256aa)
thiamine biosynthesis protein ThiF n=1 Tax=Desulfobacter curvatus RepID=UPI000376E67D
UBA/THIF-type NAD/FAD binding protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
S7_scaffold_3_curated_26
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

21781..22809
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LSB1_HALO1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
S7_scaffold_3_curated_27
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(23091..23987)
DNA (897bp) protein (299aa)
Prophage antirepressor id=4384175 bin=GWC2_OP3-like_45_7 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica) rbh
prophage antirepressor rbh
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
S7_scaffold_3_curated_28
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(24009..25640)
DNA (1632bp) protein (544aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9) rbh
Glucose-6-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000255|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000255|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=PGI {ECO:0000255|HAMAP-Rule:MF_00473};; Phosphohexose isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=PHI {ECO:0000255|HAMAP-Rule:MF_00473};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Glucose-6-phosphate isomerase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3M6_9BACT rbh
S7_scaffold_3_curated_29
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25671..26684)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PUX7_CLOSD
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH20457.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
S7_scaffold_3_curated_30
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26778..27332)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2C731
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ58359.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
Displaying items 1-30 of 415 in total

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