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S9_scaffold_324_curated

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_324_curated_1
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..343
DNA (342bp) protein (114aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_2
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

393..1400
DNA (1008bp) protein (336aa)
2-keto-4-pentenoate hydratase n=1 Tax=alpha proteobacterium L41A RepID=UPI000365F5D1 rbh
fumarylacetoacetate hydrolase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1499..2356
DNA (858bp) protein (286aa)
Tat pathway signal sequence domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QP63_BREDI
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EKY29342.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
TonB family protein
S9_scaffold_324_curated_trna_1
unknown

Not on your lists

2469..2550
DNA (82bp)
transferRNA Leu
S9_scaffold_324_curated_4
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2576..3346)
DNA (771bp) protein (257aa)
Arsenic resistance protein arsH n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YW32_9CAUL rbh
Arsenic resistance protein arsH {ECO:0000313|EMBL:GAD59696.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
NADPH-dependent FMN reductase rbh
S9_scaffold_324_curated_5
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..3768)
DNA (423bp) protein (141aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
Arsenate reductase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZF20_9CAUL
arsenate reductase
S9_scaffold_324_curated_6
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3776..4111)
DNA (336bp) protein (112aa)
Transcriptional regulator, ArsR family n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AYC0_9CAUL
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:GAD59698.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
regulatory protein ArsR
S9_scaffold_324_curated_7
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4230..5306
DNA (1077bp) protein (359aa)
Arsenical-resistance protein ACR3 n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3APQ2_9CAUL rbh
Arsenical-resistance protein ACR3 {ECO:0000313|EMBL:GAD59699.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
arsenical-resistance protein ACR3 rbh
S9_scaffold_324_curated_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5450..6709
DNA (1260bp) protein (420aa)
Bicyclomycin resistance protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVR4_BREDI rbh
Bcr/CflA subfamily drug resistance transporter rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_9
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6769..8727
DNA (1959bp) protein (653aa)
Leukotriene A4 hydrolase, C-terminal family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W771_9CAUL rbh
peptidase M1 membrane alanine aminopeptidase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_10
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8839..9942
DNA (1104bp) protein (368aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27) rbh
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AR19_9CAUL rbh
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:GAD60159.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
S9_scaffold_324_curated_11
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9935..10117
DNA (183bp) protein (61aa)
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
S9_scaffold_324_curated_12
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10166..11467)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AYX2_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD59903.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hemolysin rbh
S9_scaffold_324_curated_13
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11464..12765)
DNA (1302bp) protein (434aa)
Hemolysins and related proteins containing CBS domains n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U3AQC8_9CAUL rbh
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:GAD59904.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein rbh
S9_scaffold_324_curated_14
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12859..16143)
DNA (3285bp) protein (1095aa)
hypothetical protein n=1 Tax=Henriciella marina RepID=UPI00037F0DA4 rbh
putative DNA polymerase III subunit alpha rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_15
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16140..17711)
DNA (1572bp) protein (524aa)
nucleotidyltransferase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003B4DB3B rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_16
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17656..18309)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI0003746D4D
Uncharacterized protein {ECO:0000313|EMBL:KEJ90890.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565.;"
hypothetical protein
S9_scaffold_324_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18397..18819)
DNA (423bp) protein (141aa)
Large-conductance mechanosensitive channel n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9T5_BREDI
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
large conductance mechanosensitive channel protein
S9_scaffold_324_curated_18
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18826..19113)
DNA (288bp) protein (96aa)
Integration host factor subunit beta n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QM18_BRESC
integration host factor subunit beta
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
S9_scaffold_324_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19359..21068)
DNA (1710bp) protein (570aa)
30S ribosomal protein S1 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWV8_BREDI rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
30S ribosomal protein S1 rbh
S9_scaffold_324_curated_20
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21223..21873)
DNA (651bp) protein (217aa)
cytidylate kinase (EC:2.7.4.14) rbh
Cytidylate kinase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDE6_9CAUL rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_21
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21870..23192)
DNA (1323bp) protein (441aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=alpha proteobacterium L41A RepID=UPI00036B8B0F rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_22
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23323..23787
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00035F418E
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_trna_2
unknown

Not on your lists

23958..24030
DNA (73bp)
transferRNA Ala
S9_scaffold_324_curated_23
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24137..24559
DNA (423bp) protein (141aa)
DoxX n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NBU9_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
S9_scaffold_324_curated_24
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24661..25080
DNA (420bp) protein (140aa)
Heat shock protein Hsp20 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QM13_BRESC
heat shock protein Hsp20
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_25
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25164..25421
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QM12_BRESC
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_26
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25542..26009)
DNA (468bp) protein (156aa)
PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9F8_9CAUL
PTS IIA-like nitrogen-regulatory protein PtsN
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_324_curated_27
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26083..26745)
DNA (663bp) protein (221aa)
Ribosomal subunit interface protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QM10_BRESC rbh
ribosomal subunit interface protein rbh
Ribosomal subunit interface protein {ECO:0000313|EMBL:ADL00094.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
S9_scaffold_324_curated_28
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26909..28426)
DNA (1518bp) protein (506aa)
RNA polymerase sigma-54 factor n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9F6_9CAUL rbh
RNA polymerase, sigma-54 subunit RpoN rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
Displaying items 1-30 of 44 in total

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