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S9_scaffold_256_curated

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_256_curated_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..10532)
DNA (10530bp) protein (3510aa)
adhesin HecA family protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002378536 rbh
Filamentous hemagglutinin family outer membrane protein {ECO:0000313|EMBL:ESG63556.1}; TaxID=1079477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Muenchen str. baa1594.;"
adhesin HecA family
S9_scaffold_256_curated_2
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10545..12287)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037293EB rbh
hemolysin activator HlyB domain-containing protein rbh
Tax=GWA2_Gallionellales_54_124_curated
S9_scaffold_256_curated_3
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12588..13571
DNA (984bp) protein (328aa)
Integral membrane protein TerC n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNZ2_ACCPU rbh
Integral membrane protein TerC rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_4
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13568..14080
DNA (513bp) protein (171aa)
UspA domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RNZ3_ACCPU
UspA domain-containing protein
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_5
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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14145..14807
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036EB00B
XRE family transcriptional regulator {ECO:0000313|EMBL:KHD30511.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein
S9_scaffold_256_curated_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14804..16105
DNA (1302bp) protein (434aa)
Integral membrane sensor signal transduction histidine kinase id=1262001 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
sensory histidine kinase in two-component regulatory system; signal peptide
Tax=CG_Hydro_01
S9_scaffold_256_curated_7

Not on your lists

16203..16511
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EEV6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE17101.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S9_scaffold_256_curated_8

Not on your lists

16511..18271
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F6B7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE17102.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
actP; acetate permease rbh
S9_scaffold_256_curated_9
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18565..18819
DNA (255bp) protein (85aa)
hypothetical protein id=12552999 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_10
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18829..20685
DNA (1857bp) protein (619aa)
Na+/solute symporter n=1 Tax=Thauera sp. 63 RepID=N6Y5T8_9RHOO rbh
Na+/solute symporter rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_11
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20817..21224
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F6S8_9BACT
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_12
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21228..21764)
DNA (537bp) protein (179aa)
chorismate lyase (EC:4.1.3.-)
Probable chorismate pyruvate-lyase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=UBIC_DECAR
Tax=BJP_IG2103_Dechloromonas_60_92
S9_scaffold_256_curated_13
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21764..22207)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AZ8_DECAR
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_14
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22212..22775)
DNA (564bp) protein (188aa)
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AZ7_DECAR
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_15
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22878..25172
DNA (2295bp) protein (765aa)
ABC transporter, transmembrane region:ABC transporter related protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AY9_DECAR rbh
ABC transporter, transmembrane region:ABC transporter related rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_16
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25182..25652
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002ECBC01
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_17
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25664..27901
DNA (2238bp) protein (746aa)
Cyanophycin synthetase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AY7_DECAR rbh
cyanophycin synthetase rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_18
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27920..30502
DNA (2583bp) protein (861aa)
Cyanophycin synthetase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AY6_DECAR rbh
cyanophycin synthetase rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_19
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30480..31274
DNA (795bp) protein (265aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107) rbh
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AX6_DECAR rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_256_curated_20
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31271..31675
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AX5_DECAR
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_60_92
S9_scaffold_256_curated_trna_1
unknown

Not on your lists

31701..31782
DNA (82bp)
transferRNA Leu
S9_scaffold_256_curated_21
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31846..32892
DNA (1047bp) protein (349aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=QUEA_DECAR rbh
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_22
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32882..33994
DNA (1113bp) protein (371aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29) rbh
Queuine tRNA-ribosyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=TGT_DECAR rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_256_curated_23
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34037..34360
DNA (324bp) protein (108aa)
Protein translocase subunit yajC n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AX2_DECAR
yajC; preprotein translocase subunit YajC
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_24
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34410..36293
DNA (1884bp) protein (628aa)
Protein translocase subunit SecD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47AX1_DECAR rbh
secD; preprotein translocase subunit SecD rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_25
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36300..37247
DNA (948bp) protein (316aa)
Protein-export membrane protein SecF n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJX7_AZOSU rbh
protein-export membrane protein, SecD/SecF family rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_26
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37683..38384
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. HAL1 RepID=G4F6G7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHA15565.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
hypothetical protein
S9_scaffold_256_curated_27
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38440..39054
DNA (615bp) protein (205aa)
Putative threonine efflux protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y9J8_THIV6 rbh
putative threonine efflux protein rbh
Putative threonine efflux protein {ECO:0000313|EMBL:AFL73666.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
S9_scaffold_256_curated_28
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39160..40368)
DNA (1209bp) protein (403aa)
Aminotransferase, class V:Aromatic amino acid beta-eliminating lyase/threonine aldolase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FW7_DECAR rbh
aminotransferase class V rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_256_curated_29
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40409..41305)
DNA (897bp) protein (299aa)
Nitrogen fixation protein NifU n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FW8_DECAR rbh
Fe-S cluster assembly protein NifU rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
Displaying items 1-30 of 47 in total

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