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S9_scaffold_279_curated

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_279_curated_1
unknown

Not on your lists

374..895
DNA (522bp) protein (174aa)

This feature has no annotations

S9_scaffold_279_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(934..2367)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPS8_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX27954.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Hypothetical protein
S9_scaffold_279_curated_3
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2446..4647)
DNA (2202bp) protein (734aa)
Peptide ABC transporter ATPase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MF34_9RHIZ rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EKF20721.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
oligopeptide/dipeptide ABC transporter ATPase rbh
S9_scaffold_279_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4651..5808)
DNA (1158bp) protein (386aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTQ5_9RHIZ rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK55891.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
binding-protein-dependent transport systems inner membrane component rbh
S9_scaffold_279_curated_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5821..6855)
DNA (1035bp) protein (345aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTQ6_9RHIZ rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK55892.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
binding-protein-dependent transport system inner membrane protein rbh
S9_scaffold_279_curated_6
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6945..8588)
DNA (1644bp) protein (548aa)
Twin-arginine translocation pathway signal n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N9B7_9RHIZ rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:KFB09647.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
twin-arginine translocation pathway signal rbh
S9_scaffold_279_curated_7
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8915..10165
DNA (1251bp) protein (417aa)
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YGF9_MOBAS rbh
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EAS49266.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
S9_scaffold_279_curated_8
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10162..11286
DNA (1125bp) protein (375aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AH46_RHIRD rbh
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:EMS97493.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
L-lactate dehydrogenase rbh
S9_scaffold_279_curated_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11290..11709)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FBDB1F
Uncharacterized protein {ECO:0000313|EMBL:EKS36961.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
S9_scaffold_279_curated_10
unknown

Not on your lists

comp(11697..11900)
DNA (204bp) protein (68aa)

This feature has no annotations

S9_scaffold_279_curated_11
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11950..12453)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0B692_BURCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI90331.1}; Flags: Precursor;; TaxID=339670 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia; cepacia (strain AMMD)).;"
S9_scaffold_279_curated_12
unknown

Not on your lists

comp(12513..13016)
DNA (504bp) protein (168aa)

This feature has no annotations

S9_scaffold_279_curated_13
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13156..14823
DNA (1668bp) protein (556aa)
Putative integral membrane protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QM21_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
S9_scaffold_279_curated_14
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14882..15244
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WI93_9SPHN
protein of unassigned function
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
S9_scaffold_279_curated_15
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15244..15936
DNA (693bp) protein (231aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidiphilium sp. PM RepID=F7S681_9PROT
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGO95347.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
S9_scaffold_279_curated_16
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15937..17667)
DNA (1731bp) protein (577aa)
acetolactate synthase catalytic subunit (EC:2.2.1.6)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RJC1_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR26196.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
S9_scaffold_279_curated_17
bacterium YEK0313, Bacteria

Not on your lists

comp(17766..18251)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036CBC0C
Transcriptional regulator HosA {ECO:0000313|EMBL:CEJ15239.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Transcriptional regulator
S9_scaffold_279_curated_18
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18491..19519
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00037346BD rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KGE00868.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
TRAP dicarboxylate transporter subunit DctP
S9_scaffold_279_curated_19
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19632..20156
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036C64D0
TRAP dicarboxylate transporter subunit DctQ
TRAP dicarboxylate transporter subunit DctQ {ECO:0000313|EMBL:AJE45058.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
S9_scaffold_279_curated_20
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20153..21457
DNA (1305bp) protein (435aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Wenxinia marina RepID=UPI00035E5628 rbh
TRAP C4-dicarboxylate transporter permease DctM
TRAP C4-dicarboxylate transporter permease DctM {ECO:0000313|EMBL:AJE45059.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
S9_scaffold_279_curated_21
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21585..22706
DNA (1122bp) protein (374aa)
Curli assembly protein CsgC n=2 Tax=Labrenzia RepID=U7GGB0_9RHOB rbh
Curli assembly protein CsgC {ECO:0000313|EMBL:ERP96522.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
rcdB; Curdlan synthesis protein
S9_scaffold_279_curated_22
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22708..24684
DNA (1977bp) protein (659aa)
Glycosyl transferase, family 2 n=1 Tax=Roseobacter sp. GAI101 RepID=B7RS49_9RHOB rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EEB82629.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. GAI101.;"
Glycosyl transferase rbh
S9_scaffold_279_curated_23
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24689..25789)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7GE58_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:ERP96520.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
hypothetical protein
S9_scaffold_279_curated_24
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25902..27092)
DNA (1191bp) protein (397aa)
Glycine betaine/L-proline ABC transporter ATPase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BXW4_9RHIZ rbh
Glycine betaine/L-proline ABC transporter ATPase {ECO:0000313|EMBL:EIM74416.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
choline ABC transporter, ATP-binding protein rbh
S9_scaffold_279_curated_25
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27089..27943)
DNA (855bp) protein (285aa)
opuAB; glycine/betaine/proline ABC transporter membrane protein (EC:3.6.3.32) rbh
Glycine/betaine/proline ABC transporter membrane protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BXW5_9RHIZ rbh
Glycine/betaine/proline ABC transporter membrane protein {ECO:0000313|EMBL:EIM74417.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
S9_scaffold_279_curated_26
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28018..28971)
DNA (954bp) protein (318aa)
Choline ABC transporter periplasmic binding protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BXW6_9RHIZ rbh
Choline ABC transporter periplasmic binding protein {ECO:0000313|EMBL:EIM74418.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Choline ABC transporter periplasmic binding protein rbh
S9_scaffold_279_curated_27
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29172..29786
DNA (615bp) protein (205aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
thymidine kinase n=1 Tax=Ahrensia kielensis RepID=UPI0003706BBB rbh
thymidine kinase
S9_scaffold_279_curated_28
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29884..31011
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BXX4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM74426.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
membrane protein
S9_scaffold_279_curated_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31012..32124)
DNA (1113bp) protein (371aa)
Oxidoreductase, FAD-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSC7_9RHIZ rbh
Oxidoreductase, FAD-binding protein {ECO:0000313|EMBL:EHK56337.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
oxidoreductase, FAD-binding protein rbh
S9_scaffold_279_curated_30
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32463..33191
DNA (729bp) protein (243aa)
Transcriptional regulator, LuxR family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YAA6_MESOW
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEH86505.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying items 1-30 of 52 in total

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