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S9_scaffold_46_curated

Search features with annotation key words

Displaying items 1-30 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_46_curated_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..226)
DNA (225bp) protein (75aa)
Phosphonoacetate hydrolase {ECO:0000313|EMBL:CDX15780.1}; EC=3.11.1.2 {ECO:0000313|EMBL:CDX15780.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
phosphonoacetate hydrolase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI0003A29037
phosphonoacetate hydrolase
S9_scaffold_46_curated_2
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(325..1236)
DNA (912bp) protein (304aa)
Aminoethylphosphonate catabolism associated LysR family transcriptional regulator n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PPW1_9BRAD rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJF67940.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
LysR family transcription regulator protein
S9_scaffold_46_curated_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1349..2422
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036A8452 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KJC61326.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
iron-containing alcohol dehydrogenase family protein
S9_scaffold_46_curated_4
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2493..3404
DNA (912bp) protein (304aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQ80_9PROT rbh
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF67939.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
phosphonate ABC transporter substrate-binding protein
S9_scaffold_46_curated_5
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3470..4222
DNA (753bp) protein (251aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
phosphonate ABC transporter ATP-binding protein n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028952D3 rbh
phosphonate ABC transporter ATP-binding protein
S9_scaffold_46_curated_6
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4222..5046
DNA (825bp) protein (275aa)
phosphonate ABC transporter permease n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289B326 rbh
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KJF67938.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
phosphonate ABC transporter ATP-binding protein rbh
S9_scaffold_46_curated_7
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5046..5891
DNA (846bp) protein (282aa)
phosphonate ABC transporter permease n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289AB81 rbh
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KJF67965.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
phosphonate ABC transporter permease
S9_scaffold_46_curated_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6402..7226)
DNA (825bp) protein (275aa)
transposase IS4 n=2 Tax=Rhizobium leguminosarum RepID=UPI000380D1F2 rbh
hypothetical protein
Putative transposase Tnp {ECO:0000313|EMBL:AFL55120.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
S9_scaffold_46_curated_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7730..8128
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I079_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53625.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S9_scaffold_46_curated_10
unknown

Not on your lists

8125..8319
DNA (195bp) protein (65aa)

This feature has no annotations

S9_scaffold_46_curated_11
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8449..8784
DNA (336bp) protein (112aa)
UPI0003CE1AAD related cluster n=1 Tax=unknown RepID=UPI0003CE1AAD
Uncharacterized protein {ECO:0000313|EMBL:ESY82480.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
S9_scaffold_46_curated_12
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9025..9798)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidiphilium sp. PM RepID=F7S659_9PROT rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGO95374.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
putative oxidoreductase rbh
S9_scaffold_46_curated_13
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10472..11626
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0B0_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89371.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S9_scaffold_46_curated_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11739..13076
DNA (1338bp) protein (446aa)
Type III restriction enzyme, res subunit n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRM7_9RHOB rbh
Strain MEJ076 contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ01096.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
type III restriction enzyme, res subunit rbh
S9_scaffold_46_curated_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13073..13789
DNA (717bp) protein (239aa)
Strain MEJ076 contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ01095.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
S9_scaffold_46_curated_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13789..16683
DNA (2895bp) protein (965aa)
DNA methylase N-4/N-6 n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRM9_9RHOB rbh
Strain MEJ076 contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ01094.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
DNA methylase N-4/N-6 domain-containing protein rbh
S9_scaffold_46_curated_17
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16688..16981
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3HUE8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMG51272.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
S9_scaffold_46_curated_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17197..19209
DNA (2013bp) protein (671aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Putative DNA helicase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRN1_9RHOB rbh
UvrD/REP helicase rbh
S9_scaffold_46_curated_19
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19328..24094
DNA (4767bp) protein (1589aa)
DNA helicase n=1 Tax=Sphingomonas elodea RepID=UPI0002630412 rbh
DNA helicase {ECO:0000313|EMBL:KJS42971.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
putative DNA helicase-like protein rbh
S9_scaffold_46_curated_20
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24131..25327
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AFE1_RHIET rbh
Uncharacterized protein {ECO:0000313|EMBL:EGE56830.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein rbh
S9_scaffold_46_curated_21
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25722..26828
DNA (1107bp) protein (369aa)
UPI0003D04A73 related cluster n=1 Tax=unknown RepID=UPI0003D04A73 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ42964.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
Integrase rbh
S9_scaffold_46_curated_trna_4
unknown

Not on your lists

comp(26909..26980)
DNA (72bp)
transferRNA Glu
S9_scaffold_46_curated_22
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27338..28093)
DNA (756bp) protein (252aa)
UPI0003CE1781 related cluster n=1 Tax=unknown RepID=UPI0003CE1781
Uncharacterized protein {ECO:0000313|EMBL:ESW77696.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
S9_scaffold_46_curated_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28254..28919
DNA (666bp) protein (222aa)
UPI0003CE3DE7 related cluster n=1 Tax=unknown RepID=UPI0003CE3DE7
Uncharacterized protein {ECO:0000313|EMBL:CDX52543.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
S9_scaffold_46_curated_24
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28938..32093)
DNA (3156bp) protein (1052aa)
Acriflavin resistance protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P3U4_9RHIZ rbh
Acriflavin resistance protein {ECO:0000313|EMBL:EKF42041.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
acriflavin resistance protein rbh
S9_scaffold_46_curated_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32111..33247)
DNA (1137bp) protein (379aa)
RND family efflux transporter MFP subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LMG1_9RHIZ rbh
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EKF18979.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
RND family efflux transporter, MFP subunit rbh
S9_scaffold_46_curated_26

Not on your lists

33539..34171
DNA (633bp) protein (211aa)
Transcriptional regulator n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPN1_9BACT
Transcriptional regulator {ECO:0000313|EMBL:ADI16372.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
TetR family transcriptional regulator
S9_scaffold_46_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34176..35279)
DNA (1104bp) protein (368aa)
Patatin n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLS6_9RHIZ rbh
Patatin {ECO:0000313|EMBL:EHK58334.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
patatin rbh
S9_scaffold_46_curated_28
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35282..36064)
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WSN7_RHOS5 rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KGB82612.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
3-hydroxybutyrate dehydrogenase rbh
S9_scaffold_46_curated_29
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36164..37363)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LHG6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF17169.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein rbh
Displaying items 1-30 of 175 in total

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