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S9_scaffold_159_curated

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_159_curated_1
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(355..1107)
DNA (753bp) protein (251aa)
Precorrin-6A synthase (Deacetylating) n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2T1_9RHOB rbh
precorrin-6A synthase (deacetylating), cobF rbh
Tax=BJP_IG2158_Rhodobacterales_69_12
S9_scaffold_159_curated_2
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1165..2187)
DNA (1023bp) protein (341aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21) rbh
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037A443C rbh
S9_scaffold_159_curated_3
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2277..3116)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W3Y7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN07275.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
S9_scaffold_159_curated_4
unknown

Not on your lists

comp(3183..3272)
DNA (90bp) protein (30aa)

This feature has no annotations

S9_scaffold_159_curated_5
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3283..4662)
DNA (1380bp) protein (460aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C2C8_NITHN rbh
Oxidoreductase FAD/NAD(P)-binding domain-containing protein {ECO:0000313|EMBL:KCZ99996.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein rbh
S9_scaffold_159_curated_6
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4729..5985
DNA (1257bp) protein (419aa)
Aminopeptidase S (Leu, Val, Phe, Tyr preference) {ECO:0000313|EMBL:ESR27290.1}; EC=3.4.11.24 {ECO:0000313|EMBL:ESR27290.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Aminopeptidase S (Leu, Val, Phe, Tyr preference) n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RW93_9RHIZ rbh
peptidase M29, aminopeptidase II rbh
S9_scaffold_159_curated_7
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5976..6593
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W1E9_9RHOB
Methyltransferase domain protein {ECO:0000313|EMBL:KGM86300.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
hypothetical protein
S9_scaffold_159_curated_8
bacterium YEK0313, Bacteria

Not on your lists

comp(6604..7155)
DNA (552bp) protein (184aa)
Transcriptional regulator, MarR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11K65_MESSB
Transcriptional activatory protein BadR {ECO:0000313|EMBL:CEJ10106.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
MarR family transcriptional regulator
S9_scaffold_159_curated_9
Brucella microti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7166..7960)
DNA (795bp) protein (265aa)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC:4.2.-.-)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase n=36 Tax=Brucella RepID=A9MD79_BRUC2 rbh
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:ACU50264.1}; TaxID=568815 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella microti (strain CCM 4915).;"
S9_scaffold_159_curated_10
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7957..8835)
DNA (879bp) protein (293aa)
UPI0003CE4CD4 related cluster n=1 Tax=unknown RepID=UPI0003CE4CD4 rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ESW91927.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
fumarylacetoacetate (FAA) hydrolase rbh
S9_scaffold_159_curated_11
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8851..9831)
DNA (981bp) protein (327aa)
Extradiol ring-cleavage dioxygenase:Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWS8_POLGS rbh
hpaD; glyoxalase/Bleomycin resistance protein rbh
Extradiol ring-cleavage dioxygenase:Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I {ECO:0000313|EMBL:ADZ70403.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S9_scaffold_159_curated_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9918..11429)
DNA (1512bp) protein (504aa)
Putative NAD-dependent aldehyde dehydrogenase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IX87_POLGS rbh
hpaE; 5-carboxymethyl-2-hydroxymuconate delta-isomerase rbh
Putative NAD-dependent aldehyde dehydrogenase family protein {ECO:0000313|EMBL:ADZ70405.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S9_scaffold_159_curated_13
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11451..11837)
DNA (387bp) protein (129aa)
Putative 5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KM22_RHISN
5-carboxymethyl-2-hydroxymuconate isomerase
Putative 5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:ACP23458.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
S9_scaffold_159_curated_14
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11983..12906
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DB9335 rbh
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
1-phosphofructokinase
S9_scaffold_159_curated_15
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12910..13881)
DNA (972bp) protein (324aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF142 RepID=J2AVW7_9RHIZ rbh
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EJJ27580.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
D-isomer specific 2-hydroxyacid dehydrogenase
S9_scaffold_159_curated_16
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13874..14767)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000361B9FA rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR22610.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Putative dehydrogenase, with NAD binding domain
S9_scaffold_159_curated_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14778..15833)
DNA (1056bp) protein (352aa)
FldA protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6U9Z9_9RHOB rbh
FldA protein {ECO:0000313|EMBL:EJW09891.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
PrpF protein
S9_scaffold_159_curated_18
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15845..16519)
DNA (675bp) protein (225aa)
Dimethylmenaquinone methyltransferase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6A5_POLGS rbh
dimethylmenaquinone methyltransferase rbh
Dimethylmenaquinone methyltransferase family protein {ECO:0000313|EMBL:ADZ71279.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S9_scaffold_159_curated_19
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16519..17250)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCF1_PELHB rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEQ53745.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
S9_scaffold_159_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17267..18229)
DNA (963bp) protein (321aa)
Metapyrocatechase catechol 2,3-dioxygenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT71_9RHIZ rbh
Metapyrocatechase catechol 2,3-dioxygenase {ECO:0000313|EMBL:EHK56070.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Catechol 2,3-dioxygenase
S9_scaffold_159_curated_21
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18229..19143)
DNA (915bp) protein (305aa)
2-pyrone-4,6-dicarboxylic acid hydrolase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UB81_9RHOB rbh
2-pyrone-4,6-dicarboxylic acid hydrolase {ECO:0000313|EMBL:EJW09894.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
2-pyrone-4,6-dicarboxylic acid hydrolase rbh
S9_scaffold_159_curated_22
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19143..21086)
DNA (1944bp) protein (648aa)
TRAP-type uncharacterized transport system, fused permease component n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RH49_9RHIZ rbh
TRAP-type uncharacterized transport system, fused permease component {ECO:0000313|EMBL:ESR22615.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
TRAP transporter, 4TM/12TM fusion protein rbh
S9_scaffold_159_curated_23
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21105..22037)
DNA (933bp) protein (311aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCE3_PELHB rbh
TRAP transporter solute receptor rbh
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:AEQ53737.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
S9_scaffold_159_curated_24
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22034..22729)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036A6A0A rbh
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEQ53738.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
S9_scaffold_159_curated_25
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22902..23258)
DNA (357bp) protein (119aa)
Cytochrome c class I n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UBB0_METS4
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ACA15491.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
S9_scaffold_159_curated_26
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23280..23618)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DEA1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AKH99480.1}; Flags: Precursor;; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hypothetical protein
S9_scaffold_159_curated_27
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23756..25003
DNA (1248bp) protein (416aa)
Malonamidase E2 n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DE14_9RHIZ rbh
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EDQ31945.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
amidase rbh
S9_scaffold_159_curated_28
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25376..26302)
DNA (927bp) protein (309aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
UPI0003CDD7B7 related cluster n=1 Tax=unknown RepID=UPI0003CDD7B7 rbh
5,10-methylenetetrahydrofolate reductase rbh
S9_scaffold_159_curated_29
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26299..27315)
DNA (1017bp) protein (339aa)
ArsR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FF1A8 rbh
ArsR family transcriptional regulator {ECO:0000313|EMBL:CDX29672.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein rbh
S9_scaffold_159_curated_30
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27427..27933
DNA (507bp) protein (169aa)
UPI0003CF77A5 related cluster n=1 Tax=unknown RepID=UPI0003CF77A5
Uncharacterized protein {ECO:0000313|EMBL:ESY79714.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein
Displaying items 1-30 of 93 in total

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