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S9_scaffold_153_curated

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Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_153_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(287..2131)
DNA (1845bp) protein (615aa)
Potassium efflux system protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW48_9RHIZ rbh
Potassium efflux system protein {ECO:0000313|EMBL:EHK55052.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
potassium efflux system protein rbh
S9_scaffold_153_curated_2
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2419..4305
DNA (1887bp) protein (629aa)
Methyl-accepting chemotaxis protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RDH2_9RHIZ
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ESR24211.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
methyl-accepting chemotaxis protein
S9_scaffold_153_curated_3
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4385..5278)
DNA (894bp) protein (298aa)
LysR family transcriptional regulator n=2 Tax=Rhizobium meliloti RepID=H0G0E7_RHIML rbh
LysR family transcriptional regulator rbh
Putative transcriptional regulator, LysR family protein {ECO:0000313|EMBL:AEH82963.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
S9_scaffold_153_curated_4
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5320..6564)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035CD67B rbh
peptidase M24 rbh
Tax=BJP_IG2158_Rhodobacterales_69_12
S9_scaffold_153_curated_5
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6577..7872)
DNA (1296bp) protein (432aa)
Probable DctM (C4-dicarboxylate permease, large subunit) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CF46_9RHOB rbh
Probable DctM (C4-dicarboxylate permease, large subunit) {ECO:0000313|EMBL:EAR51281.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
TRAP dicarboxylate transporter subunit DctM rbh
S9_scaffold_153_curated_6
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7872..8408)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L8F5_9GAMM
Tripartite ATP-independent periplasmic transporter DctQ component
Uncharacterized protein {ECO:0000313|EMBL:EPC04124.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
S9_scaffold_153_curated_7
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8413..9426)
DNA (1014bp) protein (338aa)
Putative solute-binding periplasmic protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CF48_9RHOB
Putative solute-binding periplasmic protein {ECO:0000313|EMBL:EAR51279.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
TRAP dicarboxylate transporter subunit DctP
S9_scaffold_153_curated_8
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9742..10452
DNA (711bp) protein (237aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10) rbh
Orotate phosphoribosyltransferase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQB9_9RHIZ rbh
S9_scaffold_153_curated_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10468..12441)
DNA (1974bp) protein (658aa)
adenylate cyclase protein (EC:4.6.1.1)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000371A425 rbh
Adenylate cyclase {ECO:0000313|EMBL:KDP72465.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
S9_scaffold_153_curated_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12441..16127)
DNA (3687bp) protein (1229aa)
Putative TonB-dependent receptor n=2 Tax=Rhizobium meliloti RepID=M4MP53_RHIML rbh
Hypothetical exported protein, TonB-dependent receptor protein {ECO:0000313|EMBL:CAC49867.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
TonB-dependent receptor
S9_scaffold_153_curated_11
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16442..17887)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037F0026 rbh
H+/gluconate symporter and related permease
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
S9_scaffold_153_curated_12
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17901..19031)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DZR2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM31835.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1035.;"
hypothetical protein rbh
S9_scaffold_153_curated_13
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19179..20828
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003718FDB rbh
Na/Pi cotransporter family protein {ECO:0000313|EMBL:KCZ99236.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
Na/Pi cotransporter family protein rbh
S9_scaffold_153_curated_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20844..21716)
DNA (873bp) protein (291aa)
UspA domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNP6_RHOPX
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ADU44774.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
S9_scaffold_153_curated_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21736..22581)
DNA (846bp) protein (282aa)
Universal stress family protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4X6P7_9BURK
UspA domain-containing protein {ECO:0000313|EMBL:KHS42908.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
universal stress protein
S9_scaffold_153_curated_16
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22837..24558
DNA (1722bp) protein (574aa)
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4X0L8_RHOS5 rbh
Carbonic anhydrase {ECO:0000313|EMBL:BAQ68406.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulfidophilum (Rhodobacter sulfidophilus).;"
isoleucine patch superfamily carbonic anhydrase/acetyltransferase
S9_scaffold_153_curated_17
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24555..25235)
DNA (681bp) protein (227aa)
Putative DNA-binding transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F1J8_9RHIZ
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCV10310.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
TetR family transcriptional regulator
S9_scaffold_153_curated_18
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25347..27878)
DNA (2532bp) protein (844aa)
gcd; membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein (EC:1.1.5.2) rbh
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein {ECO:0000313|EMBL:AEM40065.1}; EC=1.1.5.2 {ECO:0000313|EMBL:AEM40065.1};; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9Y909_KETVW rbh
S9_scaffold_153_curated_19
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28021..29217)
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28WG3_JANSC rbh
Uncharacterized protein {ECO:0000313|EMBL:KGL02392.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
major facilitator transporter rbh
S9_scaffold_153_curated_20
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29362..31167)
DNA (1806bp) protein (602aa)
XylR-like aromatic hydrocarbon degradgation transcriptional regulatory protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EQV2_BRASB rbh
XylR-like aromatic hydrocarbon degradgation transcriptional regulator {ECO:0000313|EMBL:EJZ33924.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
xylR; xylR-like aromatic hydrocarbon degradgation transcriptional regulator rbh
S9_scaffold_153_curated_21
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31556..33025
DNA (1470bp) protein (490aa)
xylC; benzaldehyde dehydrogenase (EC:1.2.1.28) rbh
Benzaldehyde dehydrogenase (NAD+) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EQV1_BRASB rbh
Benzaldehyde dehydrogenase {ECO:0000313|EMBL:EJZ33923.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
S9_scaffold_153_curated_22
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33099..33866
DNA (768bp) protein (256aa)
3-alpha-hydroxysteroid dehydrogenase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003482DAA rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADX45841.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S9_scaffold_153_curated_23
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33890..34774
DNA (885bp) protein (295aa)
Esterase/lipase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VQG8_RHILT rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:EJZ33921.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
esterase/lipase
S9_scaffold_153_curated_24
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34807..36126
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YE93_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBA31812.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
ABC transporter substrate-binding protein rbh
S9_scaffold_153_curated_25
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36133..36858
DNA (726bp) protein (242aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ADZ92922.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ADZ92922.1};; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028; / MMB-1).;"
Monosaccharide-transporting ATPase n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JW34_MARM1
S9_scaffold_153_curated_26
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36855..37577
DNA (723bp) protein (241aa)
ABC transporter related protein n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JW33_MARM1
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADZ92921.1}; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028; / MMB-1).;"
S9_scaffold_153_curated_27
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37577..38476
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YE90_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:CBA31806.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
ABC transporter permease rbh
S9_scaffold_153_curated_28
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38473..39435
DNA (963bp) protein (321aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JW31_MARM1 rbh
ABC transporter permease rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADZ92919.1}; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028; / MMB-1).;"
S9_scaffold_153_curated_29
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39530..41005)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000382749C rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KDP71291.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
aldehyde dehydrogenase rbh
S9_scaffold_153_curated_30
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41023..42321)
DNA (1299bp) protein (433aa)
UPI0003CFB215 related cluster n=1 Tax=unknown RepID=UPI0003CFB215 rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:KJS09162.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
glycosyl transferase,UDP-glucuronosyltransferase
Displaying items 1-30 of 158 in total

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