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S9_scaffold_26_curated

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Displaying items 1-30 of 230 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_26_curated_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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485..2686
DNA (2202bp) protein (734aa)
penicillin-binding protein 1A n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F799DF rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:ESW89868.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
penicillin-binding protein, 1A family rbh
S9_scaffold_26_curated_2
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2722..3927)
DNA (1206bp) protein (402aa)
Putative virion core protein (Lumpy skin disease virus)-like protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WUR1_RHOS5
putative virion core protein (lumpy skin disease virus)-like protein
Tax=GWF2_Lentisphaerae_45_14_curated
S9_scaffold_26_curated_3
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4017..4574)
DNA (558bp) protein (186aa)
Transcriptional regulator, LuxR family/sensory box protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0N8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO53195.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
transcriptional regulator
S9_scaffold_26_curated_4
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4845..6044
DNA (1200bp) protein (400aa)
ABC transporter permease n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557982 rbh
Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein {ECO:0000313|EMBL:EAQ14628.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein rbh
S9_scaffold_26_curated_5
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6182..6946
DNA (765bp) protein (255aa)
ABC transporter related protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUE5_9RHOB rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KAJ02527.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
amino acid ABC transporter ATP-binding protein
S9_scaffold_26_curated_6

Not on your lists

6943..7662
DNA (720bp) protein (240aa)
ABC transporter related protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUE2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL08182.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter
S9_scaffold_26_curated_7
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7662..8657
DNA (996bp) protein (332aa)
ABC transporter permease n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557985 rbh
ABC transporter permease {ECO:0000313|EMBL:KAJ02525.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
ABC transporter rbh
S9_scaffold_26_curated_8
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8688..9791
DNA (1104bp) protein (368aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUD9_9RHOB rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDQ06843.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
putative amino acid or sugar ABC transport system, permease protein rbh
S9_scaffold_26_curated_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9788..10627
DNA (840bp) protein (280aa)
Lipase 1 {ECO:0000313|EMBL:CKI25713.1}; EC=3.1.1.3 {ECO:0000313|EMBL:CKI25713.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
Hydrolase n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E5UFU7_ALCXX rbh
putative hydrolase rbh
S9_scaffold_26_curated_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10637..11086)
DNA (450bp) protein (150aa)
Host attachment protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4X0_9RHIZ
Host attachment protein {ECO:0000313|EMBL:EHH13205.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
protein required for attachment to host cells
S9_scaffold_26_curated_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11385..12818
DNA (1434bp) protein (478aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ12_9RHIZ rbh
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EHK59307.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
uroporphyrin-III C-methyltransferase rbh
S9_scaffold_26_curated_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12830..13153
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ11_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59306.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S9_scaffold_26_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13187..14857
DNA (1671bp) protein (557aa)
Nitrite and sulfite reductase 4Fe-4S region n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ10_9RHIZ rbh
Nitrite and sulfite reductase 4Fe-4S region {ECO:0000313|EMBL:EHK59305.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
nitrite and sulfite reductase 4Fe-4S region rbh
S9_scaffold_26_curated_14
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14832..15584
DNA (753bp) protein (251aa)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8) rbh
Phosphoadenosine phosphosulfate reductase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FLY0_9RHIZ rbh
S9_scaffold_26_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15661..16191
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ08_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59303.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S9_scaffold_26_curated_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16202..16651)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003697B2C
Uncharacterized protein {ECO:0000313|EMBL:CDX55218.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
S9_scaffold_26_curated_17
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16789..18399
DNA (1611bp) protein (537aa)
Choline dehydrogenase, a flavoprotein {ECO:0000313|EMBL:CDX24039.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CDX24039.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Dehydrogenase (Polyethylene glycol dehydrogenase, alcohol dehydrogenase, L-sorbose dehydrogenase) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4W4_9RHIZ rbh
dehydrogenase rbh
S9_scaffold_26_curated_18
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18403..19125)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F060_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV09716.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
CysZ-like protein rbh
S9_scaffold_26_curated_19
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19380..19718
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KDC8_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY87855.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
S9_scaffold_26_curated_20
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19816..20076
DNA (261bp) protein (87aa)
XRE family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FK21_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:ESX80400.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
helix-turn-helix domain-containing protein
S9_scaffold_26_curated_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20214..21926
DNA (1713bp) protein (571aa)
Sulfate transporter family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HK53_9RHIZ rbh
Sulfate transporter family protein {ECO:0000313|EMBL:EHK58868.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
sulfate transporter rbh
S9_scaffold_26_curated_22
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21947..22816)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379AB95 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY76695.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
S9_scaffold_26_curated_23
unknown

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comp(23238..23423)
DNA (186bp) protein (62aa)

This feature has no annotations

S9_scaffold_26_curated_24
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23514..24323
DNA (810bp) protein (270aa)
IclR family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MDJ1_9RHIZ rbh
IclR family transcriptional regulator {ECO:0000313|EMBL:EKF18860.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
transcriptional regulator family protein 32
S9_scaffold_26_curated_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24472..26178)
DNA (1707bp) protein (569aa)
Dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MNK0_9RHIZ rbh
Dehydrogenase {ECO:0000313|EMBL:EKF18862.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
dehydrogenase rbh
S9_scaffold_26_curated_26
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26210..26974)
DNA (765bp) protein (255aa)
Probable dehydrogenase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FPS1_PELBH rbh
Probable dehydrogenase {ECO:0000313|EMBL:EAU46142.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
3-oxoacyl-ACP reductase
S9_scaffold_26_curated_27
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27138..28169
DNA (1032bp) protein (344aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LM59_9RHIZ rbh
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:EKF18864.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
TRAP dicarboxylate transporter-DctP subunit rbh
S9_scaffold_26_curated_28
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28268..28843
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MDJ4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF18865.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
S9_scaffold_26_curated_29
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28836..30161
DNA (1326bp) protein (442aa)
C4-dicarboxylate transporter family protein subunit DctM n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M9P8_9RHIZ rbh
C4-dicarboxylate transporter family protein subunit DctM {ECO:0000313|EMBL:EKF18866.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
C4-dicarboxylate transporter family protein subunit DctM rbh
S9_scaffold_26_curated_30
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30508..31251
DNA (744bp) protein (248aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J2S320_9RHIZ
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EUB99348.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
dppB; peptide ABC transporter permease
Displaying items 1-30 of 230 in total

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