ggKbase home page

S10_scaffold_452_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_452_curated_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..956)
DNA (954bp) protein (318aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBL1_MESCW rbh
binding-protein-dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADV10806.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S10_scaffold_452_curated_2
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(958..1863)
DNA (906bp) protein (302aa)
UPI0003D00EBC related cluster n=1 Tax=unknown RepID=UPI0003D00EBC rbh
ABC transporter permease {ECO:0000313|EMBL:KGF70038.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
binding-protein-dependent transport systems inner membrane component rbh
S10_scaffold_452_curated_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1958..3268)
DNA (1311bp) protein (437aa)
Extracellular solute-binding protein family 1 n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X347_RHIFR rbh
extracellular solute-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AFL50303.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
S10_scaffold_452_curated_4
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3631..4266)
DNA (636bp) protein (212aa)
UPI0003CF764A related cluster n=1 Tax=unknown RepID=UPI0003CF764A
TetR family transcriptional regulator {ECO:0000313|EMBL:ESX26913.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
TetR family transcriptional regulator
S10_scaffold_452_curated_5
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4364..5566
DNA (1203bp) protein (401aa)
UPI0003CE4F88 related cluster n=1 Tax=unknown RepID=UPI0003CE4F88 rbh
UPF0261 protein X740_31400 {ECO:0000256|HAMAP-Rule:MF_00677}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
hypothetical protein rbh
S10_scaffold_452_curated_6
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5573..6439
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ELP9_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX32876.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein rbh
S10_scaffold_452_curated_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6436..6852
DNA (417bp) protein (139aa)
cupin n=1 Tax=Rhizobium loti RepID=UPI00036CCF39
Cupin {ECO:0000313|EMBL:CDX32874.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
S10_scaffold_452_curated_8
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6860..8050)
DNA (1191bp) protein (397aa)
Peptidase M24 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBK4_MESCW rbh
peptidase M24 rbh
Peptidase M24 {ECO:0000313|EMBL:ADV10799.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S10_scaffold_452_curated_9
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8331..9341)
DNA (1011bp) protein (337aa)
yjjN; L-galactonate oxidoreductase YjjN (EC:1.1.1.-) rbh
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036F2EB9 rbh
Tax=BJP_IG2158_Rhodobacterales_69_12
S10_scaffold_452_curated_10
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9420..10334)
DNA (915bp) protein (305aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037492A6 rbh
ABC transporter substrate-binding protein
Tax=BJP_IG2158_Rhodobacterales_69_12
S10_scaffold_452_curated_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10411..11184)
DNA (774bp) protein (258aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036257BF rbh
sugar ABC transporter ATP-binding protein
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF82650.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
S10_scaffold_452_curated_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11184..12164)
DNA (981bp) protein (327aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0K9A8_RHILT rbh
ABC transporter permease
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EJC74044.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
S10_scaffold_452_curated_13
unknown

Not on your lists

12337..12435
DNA (99bp) protein (33aa)

This feature has no annotations

S10_scaffold_452_curated_14
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12552..13265
DNA (714bp) protein (238aa)
GntR family transcriptional regulator n=1 Tax=Rhizobium sp. Pop5 RepID=K0VNI8_9RHIZ rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EJZ20396.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
GntR family transcriptional regulator
S10_scaffold_452_curated_trna_1
unknown

Not on your lists

comp(13526..13608)
DNA (83bp)
transferRNA Leu
S10_scaffold_452_curated_15
bacterium YEK0313, Bacteria

Not on your lists

comp(13643..14194)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037AE760
Uncharacterized protein {ECO:0000313|EMBL:CEJ09781.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
S10_scaffold_452_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14258..15229)
DNA (972bp) protein (324aa)
Lactone-specific esterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRX3_9RHIZ
Lactone-specific esterase {ECO:0000313|EMBL:EHK56528.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
lactone-specific esterase
S10_scaffold_452_curated_17
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15254..15718)
DNA (465bp) protein (155aa)
UPI0003CF1A19 related cluster n=1 Tax=unknown RepID=UPI0003CF1A19
Uncharacterized protein {ECO:0000313|EMBL:ESX98723.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
S10_scaffold_452_curated_18
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15920..16663
DNA (744bp) protein (248aa)
molybdenum cofactor biosynthesis protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375D97E
Molybdopterin binding domain-containing protein {ECO:0000313|EMBL:CDX11630.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
putative nuleotide-utilizing enzyme, moeA
S10_scaffold_452_curated_19
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16819..17658
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2NA18_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20968.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
UspA domain-containing protein
S10_scaffold_452_curated_20
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17712..18206)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YHX8_METFJ
Uncharacterized protein {ECO:0000313|EMBL:KDP75641.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
S10_scaffold_452_curated_21
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18345..18944
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F9A4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KDP75642.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Transcriptional regulator
S10_scaffold_452_curated_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19038..19535
DNA (498bp) protein (166aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010603}; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010679};; Xanthine-guanine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Xanthine phosphoribosyltransferase (EC:2.4.2.22) rbh
xanthine phosphoribosyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003666991 rbh
S10_scaffold_452_curated_23
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19633..19956
DNA (324bp) protein (108aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ43_NITHX
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABE61654.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
S10_scaffold_452_curated_24
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19953..20363
DNA (411bp) protein (137aa)
UPI0003CDD08E related cluster n=1 Tax=unknown RepID=UPI0003CDD08E
Activator of HSP90 ATPase {ECO:0000313|EMBL:ESW87653.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
activator of Hsp90 ATPase-like protein
S10_scaffold_452_curated_25
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20427..20654
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FYV8_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK77759.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
S10_scaffold_452_curated_26
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20651..21103
DNA (453bp) protein (151aa)
histidine kinase n=1 Tax=Rhizobium meliloti RepID=UPI00035C90D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD41527.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
S10_scaffold_452_curated_27
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21576..22139)
DNA (564bp) protein (188aa)
Putative nuclease n=2 Tax=Oligotropha carboxidovorans RepID=F8BQT2_OLICM
putative nuclease
Putative nuclease {ECO:0000313|EMBL:AEI08176.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
S10_scaffold_452_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22434..22925
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRY3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56507.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NUDIX hydrolase
S10_scaffold_452_curated_29
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23054..24616
DNA (1563bp) protein (521aa)
Phosphate transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRY4_9RHIZ rbh
Phosphate transporter {ECO:0000313|EMBL:KFB09839.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
phosphate transporter rbh
Displaying items 1-30 of 45 in total

View Taxonomy