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S10_scaffold_401_curated

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_401_curated_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..927)
DNA (678bp) protein (226aa)
UPI0003CEE6C2 related cluster n=1 Tax=unknown RepID=UPI0003CEE6C2
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
outer membrane lipoprotein-sorting protein
S10_scaffold_401_curated_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1033..1476)
DNA (444bp) protein (148aa)
UPI0003CFE033 related cluster n=1 Tax=unknown RepID=UPI0003CFE033
Cell division protein FtsK {ECO:0000313|EMBL:ESZ18172.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
cell division protein FtsK/SpoIIIE
S10_scaffold_401_curated_3
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1960..3594
DNA (1635bp) protein (545aa)
Predicted protein n=1 Tax=Brucella abortus NCTC 8038 RepID=D0AY48_BRUAO
Uncharacterized protein {ECO:0000313|EMBL:EXI75159.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
S10_scaffold_401_curated_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3823..5190)
DNA (1368bp) protein (456aa)
ammonia channel protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000368119D rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
amtB; ammonium transporter rbh
S10_scaffold_401_curated_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5218..5556)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II 1 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7F8N3_9RHIZ
Regulatory protein (P-II 2) for nitrogen assimilation, regulates GlnL (NRII), GlnE (ATase), and AmtB (Ammonium transporter) {ECO:0000313|EMBL:CDX46427.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
nitrogen regulatory protein P-II
S10_scaffold_401_curated_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5776..6654)
DNA (879bp) protein (293aa)
Acyl-CoA thioesterase II n=1 Tax=Nitratireductor indicus C115 RepID=K2NRW1_9RHIZ rbh
Acyl-CoA thioesterase II {ECO:0000313|EMBL:EKF40534.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
acyl-CoA thioesterase II rbh
S10_scaffold_401_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6742..7998
DNA (1257bp) protein (419aa)
2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLB0_9RHIZ rbh
2-octaprenyl-6-methoxyphenyl hydroxylase {ECO:0000313|EMBL:EHK58439.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase rbh
S10_scaffold_401_curated_8
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8009..9136)
DNA (1128bp) protein (376aa)
cysteine desulfurase n=1 Tax=Afipia birgiae RepID=UPI00035CB0F0 rbh
cysteine desulfurase rbh
Beta-eliminating lyase family protein {ECO:0000313|EMBL:AIO83008.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
S10_scaffold_401_curated_9
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9140..9490)
DNA (351bp) protein (117aa)
DsrE family protein n=1 Tax=mine drainage metagenome RepID=T1AQ28_9ZZZZ
Protein YchN {ECO:0000313|EMBL:GAK34390.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
DsrE family protein
S10_scaffold_401_curated_10
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9522..9878)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KYE6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC00389.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
S10_scaffold_401_curated_11
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9936..10934)
DNA (999bp) protein (333aa)
sulfurtransferase n=1 Tax=Thioalkalivibrio sp. ALJ6 RepID=UPI00037D95A3 rbh
TVP38/TMEM64 family membrane protein {ECO:0000313|EMBL:GAK34395.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
sulfurtransferase
S10_scaffold_401_curated_12
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10931..11779)
DNA (849bp) protein (283aa)
Possible sterol desaturase n=1 Tax=Loktanella cinnabarina LL-001 RepID=U3ADP0_9RHOB rbh
fatty acid hydroxylase rbh
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
S10_scaffold_401_curated_13
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11864..12526
DNA (663bp) protein (221aa)
Sulfurtransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2IZG3_9PROT rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
ArsR family transcriptional regulator
S10_scaffold_401_curated_14
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12545..13816)
DNA (1272bp) protein (424aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000302C878 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG64438.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S10_scaffold_401_curated_15
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13813..14934)
DNA (1122bp) protein (374aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
3-dehydroquinate synthase (EC:4.2.3.4) rbh
3-dehydroquinate synthase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DE89FB rbh
S10_scaffold_401_curated_16
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14927..15526)
DNA (600bp) protein (200aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003179ADE
shikimate kinase
S10_scaffold_401_curated_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15668..15811
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NRL0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42005.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
S10_scaffold_401_curated_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15811..16728
DNA (918bp) protein (306aa)
Tyrosine recombinase XerD n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG56_9RHIZ rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
tyrosine recombinase XerD rbh
S10_scaffold_401_curated_19
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16824..17774
DNA (951bp) protein (317aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2) rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Nitratireductor indicus C115 RepID=K2N3P1_9RHIZ rbh
S10_scaffold_401_curated_20
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17975..19180
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LHG6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF17169.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ErfK/YbiS/YcfS/YnhG family protein rbh
S10_scaffold_401_curated_21
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19182..19439
DNA (258bp) protein (86aa)
UPI0003CFB07C related cluster n=1 Tax=unknown RepID=UPI0003CFB07C
Response regulator SirA {ECO:0000313|EMBL:ESZ26798.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
S10_scaffold_401_curated_22
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19453..20595)
DNA (1143bp) protein (381aa)
ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI000375D70B rbh
Cobalamin synthesis cobW C-terminal domain protein {ECO:0000313|EMBL:AID32758.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
S10_scaffold_401_curated_23
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20600..21697)
DNA (1098bp) protein (366aa)
Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M4Z8_9RHIZ rbh
Peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 {ECO:0000313|EMBL:EKF17166.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 rbh
S10_scaffold_401_curated_24
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21906..23069
DNA (1164bp) protein (388aa)
UPI0003D02E46 related cluster n=1 Tax=unknown RepID=UPI0003D02E46 rbh
Amidohydrolase {ECO:0000313|EMBL:ESZ21973.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
amidohydrolase rbh
S10_scaffold_401_curated_trna_1
unknown

Not on your lists

23128..23201
DNA (74bp)
transferRNA Arg
S10_scaffold_401_curated_25
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23271..25100)
DNA (1830bp) protein (610aa)
UPI0003CDD1E0 related cluster n=1 Tax=unknown RepID=UPI0003CDD1E0 rbh
GTP-binding protein TypA {ECO:0000313|EMBL:ESW82028.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
GTP-binding protein TypA rbh
S10_scaffold_401_curated_26
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25312..25632
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YEA8_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH85655.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S10_scaffold_401_curated_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25654..27702)
DNA (2049bp) protein (683aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5) rbh
peptidase M3 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000374CAE4 rbh
Peptidyl-dipeptidase {ECO:0000313|EMBL:CDX42246.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
S10_scaffold_401_curated_28
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27835..28305
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FD64F8
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABG64593.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S10_scaffold_401_curated_29
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28302..29558
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003805DC2 rbh
Bcr/CflA subfamily drug resistance transporter {ECO:0000313|EMBL:EKF18659.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Bcr/CflA subfamily drug resistance transporter rbh
Displaying items 1-30 of 53 in total

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