ggKbase home page

S10_scaffold_2209_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_2209_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(74..847)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D72_METBF rbh
Protein clustered with O-phosphoseryl-tRNA(Cys) synthetase {ECO:0000313|EMBL:AKB83987.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein rbh
S10_scaffold_2209_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(873..2492)
DNA (1620bp) protein (540aa)
O-phosphoserine--tRNA(Cys) ligase {ECO:0000256|HAMAP-Rule:MF_01674}; Short=O-phosphoserine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01674};; EC=6.1.1.27 {ECO:0000256|HAMAP-Rule:MF_01674};; Non-canonical O-phosphoseryl-tRNA(Cys) synthetase {ECO:0000256|HAMAP-Rule:MF_01674}; O-phosphoseryl-tRNA(Cys) synthetase {ECO:0000256|HAMAP-Rule:MF_01674}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
O-phosphoserine--tRNA(Cys) ligase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=SEPS_METBF rbh
O-phosphoseryl-tRNA(Cys) synthetase
S10_scaffold_2209_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2885..3511)
DNA (627bp) protein (209aa)
Translin family protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D70_METBF rbh
Haloacid dehalogenase superfamily protein {ECO:0000313|EMBL:AKB83985.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
haloacid dehalogenase superfamily protein
S10_scaffold_2209_curated_4
unknown

Not on your lists

comp(4008..4235)
DNA (228bp) protein (76aa)

This feature has no annotations

S10_scaffold_2209_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4228..4500)
DNA (273bp) protein (91aa)
UPF0147 protein Mbar_A1206 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D69_METBF
UPF0147 protein MSBR3_3406 {ECO:0000256|HAMAP-Rule:MF_00342}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2209_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4779..5471
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D68_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB83983.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2209_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5616..7070)
DNA (1455bp) protein (485aa)
ATP-dependent RNA helicase, EIF-4A family n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D67_METBF rbh
ATP-dependent RNA helicase, EIF-4A family {ECO:0000313|EMBL:AKB83981.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
ATP-dependent RNA helicase, EIF-4A family
Displaying 7 items

View Taxonomy