ggKbase home page

S10_scaffold_1097_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1097_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

209..1258
DNA (1050bp) protein (350aa)
O-GlcNAc transferase, p110 subunit n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466W4_METBF rbh
Cellulose synthase subunit BcsC {ECO:0000313|EMBL:AKB80635.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
cellulose synthase subunit BcsC
S10_scaffold_1097_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1311..2036)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466W5_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB80634.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1097_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2234..3214
DNA (981bp) protein (327aa)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466W6_METBF rbh
S10_scaffold_1097_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3970..5427)
DNA (1458bp) protein (486aa)
Probable cobyric acid synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=COBQ_METBF rbh
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Cobyric acid synthase
S10_scaffold_1097_curated_5
unknown

Not on your lists

6181..6288
DNA (108bp) protein (36aa)

This feature has no annotations

S10_scaffold_1097_curated_6
unknown

Not on your lists

6236..6349
DNA (114bp) protein (38aa)

This feature has no annotations

S10_scaffold_1097_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6826..7047
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466W8_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB80631.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1097_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7432..7647
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466W9_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB80630.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1097_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7948..9183)
DNA (1236bp) protein (412aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466R0_METBF rbh
S10_scaffold_1097_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9354..10652)
DNA (1299bp) protein (433aa)
5'-deoxyadenosine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=5'-dA deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.41 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
S-adenosylhomocysteine deaminase (EC:3.5.4.28)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=MTAD_METBF rbh
S10_scaffold_1097_curated_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11024..11677)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466Q8_METBF rbh
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:AKB80627.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
metal-dependent phosphohydrolase
S10_scaffold_1097_curated_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11792..12553)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRA2_METAC rbh
Phosphopantothenate synthetase, archaeal {ECO:0000313|EMBL:AKB80626.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Phosphopantothenate synthetase, archaeal
S10_scaffold_1097_curated_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12766..13668)
DNA (903bp) protein (301aa)
Pantoate kinase, archaeal {ECO:0000313|EMBL:AKB80625.1}; EC=2.7.1.- {ECO:0000313|EMBL:AKB80625.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Pantoate kinase, archaeal (EC:2.7.1.-)
Pantothenate kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466Q6_METBF rbh
S10_scaffold_1097_curated_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13788..15047)
DNA (1260bp) protein (420aa)
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:AKB80624.1}; EC=4.1.1.36 {ECO:0000313|EMBL:AKB80624.1};; EC=6.3.2.5 {ECO:0000313|EMBL:AKB80624.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Phosphopantothenoylcysteine decarboxylase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466Q5_METBF rbh
S10_scaffold_1097_curated_15
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15356..16411
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466Q4_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB80623.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1097_curated_16
unknown

Not on your lists

16782..16937
DNA (156bp) protein (52aa)

This feature has no annotations

S10_scaffold_1097_curated_17
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17515..18153
DNA (639bp) protein (213aa)
Peptidase M12B, propeptide n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CRM8_METMJ
Uncharacterized protein {ECO:0000313|EMBL:AKB63524.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;"
hypothetical protein
Displaying 17 items

View Taxonomy