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S10_scaffold_679_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_679_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..349)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FJ6_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83456.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_679_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(410..1261)
DNA (852bp) protein (284aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FJ5_METBF rbh
S10_scaffold_679_curated_3
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1338..1829)
DNA (492bp) protein (164aa)
Probable cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FJ4_METBF
Molybdenum cofactor biosynthesis enzyme
Probable cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. Kolksee.;"
S10_scaffold_679_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2143..2328)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FJ3_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83459.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_679_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2406..3914)
DNA (1509bp) protein (503aa)
Putative sugar kinase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FJ2_METBF rbh
NAD(P)HX epimerase {ECO:0000313|EMBL:AKB83460.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
NAD(P)HX epimerase
S10_scaffold_679_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4431..5897
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FJ1_METBF rbh
Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase) {ECO:0000313|EMBL:AKB83461.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Kef-type K+ transport systems (NAD-binding component fused to domain related to exopolyphosphatase)
S10_scaffold_679_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6116..8611)
DNA (2496bp) protein (832aa)
Oligosaccharyl transferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FJ0_METBF rbh
Oligosaccharyl transferase {ECO:0000313|EMBL:AKB83462.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Oligosaccharyl transferase
S10_scaffold_679_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9728..10825
DNA (1098bp) protein (366aa)
Mannosyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FI9_METBF rbh
Mannosyltransferase WbkA {ECO:0000313|EMBL:AKB83463.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Mannosyltransferase WbkA
S10_scaffold_679_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10903..11670
DNA (768bp) protein (256aa)
Putative ABC-2 type transport system permease protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FI8_METBF rbh
O-antigen export system permease protein RfbD {ECO:0000313|EMBL:AKB83464.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
O-antigen export system permease protein RfbD
S10_scaffold_679_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11698..12951
DNA (1254bp) protein (418aa)
Putative ABC-2 type transport system ATP-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FI7_METBF rbh
ABC transporter {ECO:0000313|EMBL:AKB83465.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
ABC transporter
S10_scaffold_679_curated_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13396..16737
DNA (3342bp) protein (1114aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FI6_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB83466.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_679_curated_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16829..17998
DNA (1170bp) protein (390aa)
Hexosyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FI5_METBF rbh
Putative glycosyltransferase {ECO:0000313|EMBL:AKB83467.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
putative glycosyltransferase
S10_scaffold_679_curated_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18001..19056
DNA (1056bp) protein (352aa)
Glycosyltransferase {ECO:0000313|EMBL:AKB83468.1}; EC=2.4.1.- {ECO:0000313|EMBL:AKB83468.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Glycosyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FI4_METBF rbh
Glycosyltransferase
S10_scaffold_679_curated_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19053..20273
DNA (1221bp) protein (407aa)
Hexosyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FI3_METBF rbh
Hexosyltransferase {ECO:0000313|EMBL:AKB83469.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Hexosyltransferase
S10_scaffold_679_curated_15
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20771..21178)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TII0_METAC
Ribosomal protein S6 {ECO:0000313|EMBL:AKB83470.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_679_curated_16
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22277..23455
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FH9_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB83471.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_679_curated_17
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(23487..23942)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FH8_METBF
Ribosomal protein S6 {ECO:0000313|EMBL:AKB83472.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Ribosomal protein S6
S10_scaffold_679_curated_18
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24181..26484)
DNA (2304bp) protein (768aa)
Hydrogenase maturation protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FH7_METBF rbh
[NiFe] hydrogenase metallocenter assembly protein HypF {ECO:0000313|EMBL:AKB83473.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
[NiFe] hydrogenase metallocenter assembly protein HypF
S10_scaffold_679_curated_19
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26911..27552)
DNA (642bp) protein (214aa)
V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FH5_METBF rbh
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
S10_scaffold_679_curated_20
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27549..28931)
DNA (1383bp) protein (461aa)
ATP synthase subunit B {ECO:0000313|EMBL:KKG24664.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KKG24664.1};; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
V-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Methanosarcina barkeri RepID=VATB_METBA rbh
S10_scaffold_679_curated_21
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28934..30616)
DNA (1683bp) protein (561aa)
V-type ATP synthase alpha chain n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=VATA_METBF rbh
ATP synthase subunit A {ECO:0000313|EMBL:KKH50193.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
A1AO H+ ATPase subunit A rbh
Displaying 21 items

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