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S10_scaffold_2723_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_2723_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1435..2751
DNA (1317bp) protein (439aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
tRNA pseudouridine 13 synthase (EC:4.2.1.-)
Probable tRNA pseudouridine synthase D n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=TRUD_METBF rbh
S10_scaffold_2723_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3027..4430)
DNA (1404bp) protein (468aa)
Putative transmembrane efflux protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466V1_METBF rbh
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps {ECO:0000313|EMBL:AKB80648.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
S10_scaffold_2723_curated_3
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4427..4855)
DNA (429bp) protein (143aa)
Transcriptional regulator, MarR family n=2 Tax=Methanosarcina mazei RepID=M1P5D6_METMZ
MarR family transcriptional regulator {ECO:0000313|EMBL:KKH94691.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
transcriptional regulator, MarR family
S10_scaffold_2723_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5148..5660)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467A3_METBF
Cell surface protein {ECO:0000313|EMBL:AKB80649.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2723_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7037..8290)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467A4_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB80650.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein rbh
S10_scaffold_2723_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9823..10221
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465M4_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB80655.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_2723_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10823..11035)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465M5_METBF
Ubiquitin-like small archaeal modifier protein SAMP2 {ECO:0000313|EMBL:AKB80656.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Ubiquitin-like small archaeal modifier protein SAMP2
S10_scaffold_2723_curated_8
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11032..11160)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PTX0_METMZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF95601.1}; TaxID=1236903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei Tuc01.;"
S10_scaffold_2723_curated_trna_1
unknown

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comp(11744..11815)
DNA (72bp)
transferRNA Gly
Displaying 9 items

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