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S10_scaffold_1186_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1186_curated_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

96..965
DNA (870bp) protein (290aa)
Crispr-associated ramp protein, Cmr6 family n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJQ3_9AQUI
CRISPR-associated RAMP Cmr6 {ECO:0000313|EMBL:AKB40297.1}; TaxID=1434117 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei WWM610.;"
CRISPR-associated RAMP protein, Cmr6 family
S10_scaffold_1186_curated_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

979..1758
DNA (780bp) protein (260aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB40298.1}; TaxID=1434117 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei WWM610.;"
S10_scaffold_1186_curated_3
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1765..2664
DNA (900bp) protein (300aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB40299.1}; TaxID=1434117 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei WWM610.;"
S10_scaffold_1186_curated_4
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3485..3766)
DNA (282bp) protein (94aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB43055.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
S10_scaffold_1186_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4135..4476
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB80714.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
S10_scaffold_1186_curated_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4719..4898
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB62319.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
S10_scaffold_1186_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5058..5402
DNA (345bp) protein (115aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUU3_METMA
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AKB80713.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1186_curated_8
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5456..5923)
DNA (468bp) protein (156aa)
Universal stress protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BU4_METBF
Universal stress protein {ECO:0000313|EMBL:AKB12661.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
Universal stress protein
S10_scaffold_1186_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6652..7002
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BT3_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ70659.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S10_scaffold_1186_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7223..7804
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BT4_METBF rbh
Thioredoxin
Uncharacterized protein {ECO:0000313|EMBL:AAZ70658.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S10_scaffold_1186_curated_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7808..8452
DNA (645bp) protein (215aa)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BT5_METBF rbh
cytochrome C-type biogenesis protein (ccdA), conjectural
Cytochrome c-type biogenesis protein CcdA {ECO:0000313|EMBL:AAZ70657.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S10_scaffold_1186_curated_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8590..9066
DNA (477bp) protein (159aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUT9_METMA
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AKB80710.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
ArsR family transcriptional regulator
S10_scaffold_1186_curated_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9132..9881
DNA (750bp) protein (250aa)
Putative methyltransferase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUT8_METMA rbh
tRNA (Adenine57/58-N1)-methyltransferase {ECO:0000313|EMBL:AKB80709.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
arsM; arsenite S-adenosylmethyltransferase rbh
S10_scaffold_1186_curated_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10170..10556
DNA (387bp) protein (129aa)
Arsenate reductase {ECO:0000313|EMBL:AKB80708.1}; EC=1.20.4.1 {ECO:0000313|EMBL:AKB80708.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Arsenate reductase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TLD3_METAC
arsC; arsenate reductase
S10_scaffold_1186_curated_15
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10690..10989
DNA (300bp) protein (100aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BU2_METBF
Transcriptional regulator {ECO:0000313|EMBL:AKB80707.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
transcriptional regulator
S10_scaffold_1186_curated_16
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11336..12307
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BU1_METBF rbh
hypothetical protein rbh
Transporter {ECO:0000313|EMBL:AKB52279.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
S10_scaffold_1186_curated_17
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12387..12620
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BU0_METBF
Thiol-disulfide isomerase and thioredoxins
Thioredoxin {ECO:0000256|PIRNR:PIRNR037031}; TaxID=1434106 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
S10_scaffold_1186_curated_18
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12586..13065
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BT9_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ70653.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S10_scaffold_1186_curated_19
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13152..13472
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q5K6_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB77497.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Hypothetical protein
S10_scaffold_1186_curated_20
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13526..14074)
DNA (549bp) protein (183aa)
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A {ECO:0000313|EMBL:AKB80705.1}; EC=2.1.1.86 {ECO:0000313|EMBL:AKB80705.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A n=2 Tax=Methanosarcina mazei RepID=M1PZ46_METMZ rbh
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A rbh
S10_scaffold_1186_curated_21
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14308..15372)
DNA (1065bp) protein (355aa)
Heavy metal resistance membrane protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BU6_METBF rbh
Arsenical-resistance protein ACR3 {ECO:0000313|EMBL:AKB80704.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
heavy metal resistance membrane protein rbh
S10_scaffold_1186_curated_22
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15416..15745)
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BU5_METBF
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AAZ70647.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S10_scaffold_1186_curated_23
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16141..16416)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q1J8_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB77161.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
S10_scaffold_1186_curated_24
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16464..16760)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q5L1_METMZ
Uncharacterized protein {ECO:0000313|EMBL:AKB80702.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Hypothetical protein
Displaying 24 items

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