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S10_scaffold_1405_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1405_curated_1
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(126..1169)
DNA (1044bp) protein (348aa)
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:AKB83206.1}; EC=1.10.3.- {ECO:0000313|EMBL:AKB83206.1};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Cytochrome d ubiquinol oxidase subunit II (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS01_METAC rbh
S10_scaffold_1405_curated_2
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1172..2488)
DNA (1317bp) protein (439aa)
Cytochrome d ubiquinol oxidase subunit I {ECO:0000313|EMBL:AKB78943.1}; EC=1.10.3.- {ECO:0000313|EMBL:AKB78943.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Cytochrome d ubiquinol oxidase, subunit I n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS02_METAC rbh
cydA; cytochrome d ubiquinol oxidase, subunit I rbh
S10_scaffold_1405_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2723..3172)
DNA (450bp) protein (150aa)
Ferric uptake regulation protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46G84_METBF
Transcriptional regulator, FUR family
Transcriptional regulator, FUR family {ECO:0000313|EMBL:AKB83208.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
S10_scaffold_1405_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3591..4700)
DNA (1110bp) protein (370aa)
Peptide chain release factor subunit 1 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FF0_METBF rbh
Eukaryotic peptide chain release factor subunit 1 {ECO:0000313|EMBL:AKB83209.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Eukaryotic peptide chain release factor subunit 1
S10_scaffold_1405_curated_5
unknown

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comp(4802..4921)
DNA (120bp) protein (40aa)

This feature has no annotations

S10_scaffold_1405_curated_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5412..6905)
DNA (1494bp) protein (498aa)
Multidrug transporter n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2Z8_CLOPA rbh
Multidrug transporter {ECO:0000313|EMBL:ETD70348.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
drug resistance transporter, EmrB/QacA subfamily rbh
S10_scaffold_1405_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7909..8379)
DNA (471bp) protein (157aa)
Regulatory protein MarR n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D211_METSW
Uncharacterized protein {ECO:0000313|EMBL:AKB83210.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
regulatory protein MarR
S10_scaffold_1405_curated_8
unknown

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8772..8969
DNA (198bp) protein (66aa)

This feature has no annotations

S10_scaffold_1405_curated_9
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9345..11744)
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1P578_METMZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB64481.1}; TaxID=213585 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei S-6.;"
hypothetical protein rbh
S10_scaffold_1405_curated_10
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12165..13352)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468E8_METBF
Cell surface protein {ECO:0000313|EMBL:AKB78203.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
cell surface protein
Displaying 10 items

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