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S10_scaffold_1171_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1171_curated_1
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..214)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KKH99335.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
S10_scaffold_1171_curated_2
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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392..715
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D49_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB83818.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1171_curated_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1225..1527
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D81_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ70161.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S10_scaffold_1171_curated_4
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2091..3107
DNA (1017bp) protein (339aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Flap structure-specific endonuclease (EC:3.-.-.-)
Flap endonuclease 1 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=FEN_METAC rbh
S10_scaffold_1171_curated_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3934..4770
DNA (837bp) protein (279aa)
Methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q2_METBF rbh
Methyltransferase {ECO:0000313|EMBL:AKB83821.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
methyltransferase rbh
S10_scaffold_1171_curated_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5458..5976
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q3_METBF rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB83822.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S10_scaffold_1171_curated_7
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6007..7290
DNA (1284bp) protein (428aa)
Putative iron complex transport system substrate-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q4_METBF rbh
putative iron complex transport system substrate-binding protein rbh
Putative iron complex transport system substrate-binding protein {ECO:0000313|EMBL:AAZ71638.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
S10_scaffold_1171_curated_8
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7287..8330
DNA (1044bp) protein (348aa)
Fe(III) dicitrate ABC transporter, permease n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q5_METBF rbh
Iron(III) dicitrate transport system permease protein FecD {ECO:0000313|EMBL:AKB83824.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Iron(III) dicitrate transport system permease protein FecD
S10_scaffold_1171_curated_9
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8327..9100
DNA (774bp) protein (258aa)
Fe(III) dicitrate ABC transporter, ATP-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468Q6_METBF rbh
Iron(III) dicitrate transport ATP-binding protein FecE {ECO:0000313|EMBL:AKB83825.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Iron(III) dicitrate transport ATP-binding protein FecE
S10_scaffold_1171_curated_10
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9762..10718)
DNA (957bp) protein (319aa)
Beta-ribofuranosylaminobenzene 5'-phosphate synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D53_METBF rbh
Beta-ribofuranosylaminobenzene 5'-phosphate synthase {ECO:0000313|EMBL:AKB83826.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
beta-ribofuranosylaminobenzene 5'-phosphate synthase
S10_scaffold_1171_curated_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11056..12600)
DNA (1545bp) protein (515aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
phosphoglycerate mutase (EC:5.4.2.1) rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=GPMI1_METBF rbh
S10_scaffold_1171_curated_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12847..13449
DNA (603bp) protein (201aa)
Transcriptional regulator n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D51_METBF rbh
Putative regulatory protein {ECO:0000313|EMBL:AKB83828.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
transcriptional regulator rbh
S10_scaffold_1171_curated_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14001..14924
DNA (924bp) protein (308aa)
UbiA prenyltransferase family protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D50_METBF rbh
UbiA prenyltransferase family protein {ECO:0000313|EMBL:AKB83829.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
UbiA prenyltransferase family protein
S10_scaffold_1171_curated_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15269..16054)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIX8_METAC rbh
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AKB83830.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Transcriptional regulator, ArsR family
Displaying 14 items

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