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S10_scaffold_281_curated

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_281_curated_1
unknown

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comp(2..310)
DNA (309bp) protein (103aa)

This feature has no annotations

S10_scaffold_281_curated_2
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(312..1241)
DNA (930bp) protein (310aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P640_LEIXC rbh
N-acetylmuramic acid-6-phosphate etherase rbh
S10_scaffold_281_curated_3
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1410..2282
DNA (873bp) protein (291aa)
RpiR family transcriptional regulator n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PBQ1_LEIXC rbh
RpiR family transcriptional regulator rbh
Uncharacterized protein {ECO:0000313|EMBL:AGW40908.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
S10_scaffold_281_curated_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2286..3113)
DNA (828bp) protein (276aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. D5 RepID=F0YYJ2_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EGB93294.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
binding-protein-dependent transport systems inner membrane component
S10_scaffold_281_curated_5
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3110..3907)
DNA (798bp) protein (266aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Clostridium ultunense Esp RepID=M1YQ16_9CLOT
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:CCQ92640.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family
S10_scaffold_281_curated_6
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4030..5331)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI00036968E9
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHO61668.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
family 1 extracellular solute-binding protein
S10_scaffold_281_curated_7
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6004..7674)
DNA (1671bp) protein (557aa)
Maltose alpha-D-glucosyltransferase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T5C2_LEIAQ
Maltose alpha-D-glucosyltransferase {ECO:0000313|EMBL:ERK69907.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
trehalose synthase
S10_scaffold_281_curated_8
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7706..8533)
DNA (828bp) protein (276aa)
ABC-type sugar transport system, permease component n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTF1_SPHPG
sugar ABC transporter permease
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:AEV30192.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
S10_scaffold_281_curated_9
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8530..9477)
DNA (948bp) protein (316aa)
ABC transporter permease n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R4L8_9CLOT
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJY75137.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
S10_scaffold_281_curated_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9470..10792)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VS70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35368.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
sugar ABC transporter periplasmic protein
S10_scaffold_281_curated_11
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10954..11892
DNA (939bp) protein (313aa)
Esterase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VV87_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK48621.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
esterase
S10_scaffold_281_curated_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12175..12981
DNA (807bp) protein (269aa)
Putative LacI family transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVT2_9ACTO
putative LacI family transcriptional regulator
Putative LacI family transcriptional regulator {ECO:0000313|EMBL:AGZ40922.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
S10_scaffold_281_curated_trna_1
unknown

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comp(13407..13488)
DNA (82bp)
transferRNA Tyr
S10_scaffold_281_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13717..14730
DNA (1014bp) protein (338aa)
LacI family transcriptional regulator id=7720082 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
LacI family transcriptional repressor {ECO:0000313|EMBL:EAR24683.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
LacI family transcriptional regulator rbh
S10_scaffold_281_curated_14
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(14747..15514)
DNA (768bp) protein (256aa)
LpqU protein id=7720083 bin=CNBR_ACT species=Amycolicicoccus subflavus genus=Amycolicicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KJC63728.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
membrane-bound lytic murein transglycosylase B
S10_scaffold_281_curated_15
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15577..15891
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B3BF31
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD41151.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
S10_scaffold_281_curated_16
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15888..16325
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PV97_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD41150.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
S10_scaffold_281_curated_17
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16350..16838
DNA (489bp) protein (163aa)
UPF0234 protein ADILRU_0473 n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XM76_9MICO
UPF0234 protein ADILRU_0473 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
nucleotide-binding protein
S10_scaffold_281_curated_18
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16835..18322
DNA (1488bp) protein (496aa)
putative phospholipase (EC:2.7.8.-) rbh
Cardiolipin synthase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AJ03_9ACTN rbh
Cardiolipin synthase {ECO:0000313|EMBL:EAR24673.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
S10_scaffold_281_curated_19
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18319..20880
DNA (2562bp) protein (854aa)
LuxR family transcriptional regulator n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289B31C rbh
Putative transcriptional regulator {ECO:0000313|EMBL:EPR76734.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_281_curated_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20945..21382
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL34838.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
S10_scaffold_281_curated_21
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21379..22752)
DNA (1374bp) protein (458aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002894063 rbh
Ferredoxin/ferredoxin-NADP reductase {ECO:0000313|EMBL:EAR24672.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
pyridine nucleotide-disulfide oxidoreductase
S10_scaffold_281_curated_22
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22749..23822)
DNA (1074bp) protein (358aa)
menX; putative polyprenyl diphosphate synthase; K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30] id=7720092 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Octaprenyl diphosphate synthase {ECO:0000313|EMBL:EPR77096.1}; EC=2.5.1.1 {ECO:0000313|EMBL:EPR77096.1};; EC=2.5.1.10 {ECO:0000313|EMBL:EPR77096.1};; EC=2.5.1.29 {ECO:0000313|EMBL:EPR77096.1};; EC=2.5.1.90 {ECO:0000313|EMBL:EPR77096.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
menX; putative polyprenyl diphosphate synthase rbh
S10_scaffold_281_curated_23
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23846..24619)
DNA (774bp) protein (258aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] id=7720093 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase
S10_scaffold_281_curated_24
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24728..25942
DNA (1215bp) protein (405aa)
menF; menaquinone-specific isochorismate synthase (EC:5.4.4.2); K02552 menaquinone-specific isochorismate synthase [EC:5.4.4.2] id=7720094 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
menF; menaquinone-specific isochorismate synthase (EC:5.4.4.2) rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04137.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
S10_scaffold_281_curated_25
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25939..26760)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AIZ8_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR24668.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
S10_scaffold_281_curated_26
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26802..28571)
DNA (1770bp) protein (590aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287A569 rbh
2-oxoglutarate decarboxylase rbh
S10_scaffold_281_curated_27
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28552..28887)
DNA (336bp) protein (112aa)
hypothetical protein id=7720097 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Membrane protein {ECO:0000313|EMBL:EPR77100.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_281_curated_28
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28966..29208
DNA (243bp) protein (81aa)
hypothetical protein id=7720098 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPR77101.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_281_curated_29
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29233..30264)
DNA (1032bp) protein (344aa)
menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-] id=7720099 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase rbh
Displaying items 1-30 of 69 in total

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