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S10_scaffold_662_curated

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_662_curated_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

254..934
DNA (681bp) protein (227aa)
Two-component system, regulatory protein id=7721354 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Two-component system, regulatory protein {ECO:0000313|EMBL:EAR24790.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
mtrA; two-component system regulatory protein rbh
S10_scaffold_662_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

938..2542
DNA (1605bp) protein (535aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
Two-component system, sensor protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI14_9ACTN rbh
two-component sensor kinase rbh
S10_scaffold_662_curated_3
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2535..4190
DNA (1656bp) protein (552aa)
lipoprotein LpqB id=7721356 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Lipoprotein LpqB {ECO:0000313|EMBL:EPR77612.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
lpqB; conserved secreted protein rbh
S10_scaffold_662_curated_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4254..4925
DNA (672bp) protein (224aa)
Competence protein F id=7721357 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Competence protein F {ECO:0000313|EMBL:EAR24787.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
amidophosphoribosyltransferase
S10_scaffold_662_curated_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4997..5668
DNA (672bp) protein (224aa)
Sigma-54 modulation protein id=7721358 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Sigma-54 modulation protein {ECO:0000313|EMBL:EAR24786.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
sigma-54 modulation protein
S10_scaffold_662_curated_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5786..8599
DNA (2814bp) protein (938aa)
Protein translocase subunit SecA id=7721359 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
secA; preprotein translocase, SecA subunit rbh
S10_scaffold_662_curated_7
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8643..9524
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003771C9F rbh
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61699.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
S10_scaffold_662_curated_8
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9538..10233
DNA (696bp) protein (232aa)
Demethylmenaquinone methyltransferase n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EPB7_STRRM
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:ELQ81080.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
dimethylmenaquinone methyltransferase
S10_scaffold_662_curated_9
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10245..10739)
DNA (495bp) protein (165aa)
Putative uncharacterized protein id=7721360 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPR77617.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_662_curated_10
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10885..11490
DNA (606bp) protein (202aa)
hypothetical protein SPAM21_04388 id=7721361 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPR77618.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_662_curated_11
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11465..11743)
DNA (279bp) protein (93aa)
translocase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287ACC1
Translocase {ECO:0000313|EMBL:KJC64170.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
phage transcriptional regulator AlpA
S10_scaffold_662_curated_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11889..12491
DNA (603bp) protein (201aa)
Putative membrane/secreted protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI06_9ACTN
Putative membrane/secreted protein {ECO:0000313|EMBL:EAR24781.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_662_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12491..13690
DNA (1200bp) protein (400aa)
putative septum formation inhibitor-activating ATPase id=7721364 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Putative regulator {ECO:0000313|EMBL:EAR24780.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative septum formation inhibitor-activating ATPase
S10_scaffold_662_curated_14
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13716..15218
DNA (1503bp) protein (501aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
Two-component system, sensor protein id=7721365 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
ATPase
S10_scaffold_662_curated_15
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15227..15565)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A3C17
Uncharacterized protein {ECO:0000313|EMBL:EYT63130.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
S10_scaffold_662_curated_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15681..15929)
DNA (249bp) protein (83aa)
Transcriptional regulator WhiB id=7721366 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
regulatory protein
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
S10_scaffold_662_curated_17
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16116..16505
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI02_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR24777.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_662_curated_18
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16625..17992
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2XQY1_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:CEL19873.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Putative secreted protein
S10_scaffold_662_curated_19
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18013..18486)
DNA (474bp) protein (158aa)
Bcp id=7721371 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Peroxiredoxin {ECO:0000313|EMBL:KJC63924.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
bcp; peroxiredoxin
S10_scaffold_662_curated_trna_1
unknown

Not on your lists

18545..18617
DNA (73bp)
transferRNA Lys
S10_scaffold_662_curated_20
unknown

Not on your lists

18939..19520
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B3B01F
S10_scaffold_662_curated_21
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19520..20107
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VZU4_ARTAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBT77147.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
S10_scaffold_662_curated_22
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20127..20642)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036A903B
Uncharacterized protein {ECO:0000313|EMBL:KJL25869.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
S10_scaffold_662_curated_23
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20762..21436
DNA (675bp) protein (225aa)
Uncharacterized membrane-associated protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BG64_SANKS
hypothetical protein
Uncharacterized membrane-associated protein {ECO:0000313|EMBL:ACZ23581.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
S10_scaffold_662_curated_24
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21532..22758
DNA (1227bp) protein (409aa)
acyltransferase n=1 Tax=Agromyces subbeticus RepID=UPI0003B57592 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP97485.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
acyltransferase
S10_scaffold_662_curated_25
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22755..24032)
DNA (1278bp) protein (426aa)
HipA-like C-terminal domain protein n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S851_9ACTO rbh
HipA-like C-terminal domain protein {ECO:0000313|EMBL:EFQ84356.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
HipA-like protein rbh
S10_scaffold_662_curated_26
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(24032..24340)
DNA (309bp) protein (103aa)
XRE family transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B4506A
XRE family transcriptional regulator
Helix-turn-helix protein {ECO:0000313|EMBL:KJF17386.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
S10_scaffold_662_curated_27
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24455..25618
DNA (1164bp) protein (388aa)
Uncharacterized protein id=7721457 bin=CNBR_ACT species=Rhodococcus sp. AW25M09 genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Contig_36, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ15140.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.;"
hypothetical protein rbh
S10_scaffold_662_curated_28
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25682..26437
DNA (756bp) protein (252aa)
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator id=7720042 bin=CNBR_ACT species=Streptomyces sp. SPB74 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KIF73234.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
GntR family transcriptional regulator
S10_scaffold_662_curated_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26528..27373)
DNA (846bp) protein (282aa)
sugar ABC transporter permease n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6812D rbh
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:KJL22141.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ABC transporter permease
Displaying items 1-30 of 39 in total

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