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S10_scaffold_1015_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1015_curated_1
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..986
DNA (984bp) protein (328aa)
Putative transporter id=7720280 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Heme ABC transporter, permease protein HmuU {ECO:0000313|EMBL:EPR76720.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
transport system permease rbh
S10_scaffold_1015_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

983..1777
DNA (795bp) protein (265aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ABC-type hemin transport system ATPase component id=7720279 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
ABC transporter
S10_scaffold_1015_curated_3
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1781..3268)
DNA (1488bp) protein (496aa)
Putative transcriptional regulator n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CPA1_CLAM3
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:CAN00898.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
S10_scaffold_1015_curated_4
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3348..3614
DNA (267bp) protein (89aa)
Uncharacterized protein id=7720278 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:ERK66520.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
S10_scaffold_1015_curated_5
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3639..3893)
DNA (255bp) protein (85aa)
Acetyltransferase n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKY5_9ACTN
Acetyltransferase {ECO:0000313|EMBL:EAR23961.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_1015_curated_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3958..4983)
DNA (1026bp) protein (342aa)
LacI family transcriptional regulator n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00035F9EAF rbh
Regulatory protein, LacI {ECO:0000313|EMBL:EAR26227.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
LacI family transcriptional regulator rbh
S10_scaffold_1015_curated_7
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5009..6454)
DNA (1446bp) protein (482aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
broad-specificity cellobiase (EC:3.2.1.21) rbh
Putative cellobiose hydrolase id=7720276 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_1015_curated_8
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6458..7366)
DNA (909bp) protein (303aa)
Sugar ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XMR1_9MICO rbh
Sugar ABC transporter permease protein {ECO:0000313|EMBL:GAD34360.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sugar ABC transporter permease rbh
S10_scaffold_1015_curated_9
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7363..8355)
DNA (993bp) protein (331aa)
Sugar ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XA27_9MICO rbh
Sugar ABC transporter permease protein {ECO:0000313|EMBL:GAD34361.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sugar ABC transporter permease rbh
S10_scaffold_1015_curated_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8444..9814)
DNA (1371bp) protein (457aa)
DNA, contig: MspTS1nb01 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN75_9MICO rbh
DNA, contig: MspTS1nb01 {ECO:0000313|EMBL:GAD34362.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sugar ABC transporter periplasmic protein rbh
S10_scaffold_1015_curated_11
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10001..11902)
DNA (1902bp) protein (634aa)
Permease of the major facilitator superfamily id=7720271 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03853.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
permease of the major facilitator superfamily rbh
S10_scaffold_1015_curated_12
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11991..12863
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289AB2B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW42499.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
S10_scaffold_1015_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12898..13725
DNA (828bp) protein (276aa)
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin id=7720270 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Putative D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EAR23962.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_1015_curated_14
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13819..15447)
DNA (1629bp) protein (543aa)
Phosphoglucomutase {ECO:0000313|EMBL:EAR25943.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EAR25943.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase id=7720268 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_1015_curated_15
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15484..16431
DNA (948bp) protein (316aa)
prephenate dehydratase id=7720267 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Prephenate dehydratase {ECO:0000313|EMBL:KJC63521.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
prephenate dehydratase rbh
S10_scaffold_1015_curated_16
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16568..17464
DNA (897bp) protein (299aa)
hypothetical protein id=7720266 bin=CNBR_ACT species=Arthrobacter sp. genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:ERK73430.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
S10_scaffold_1015_curated_17
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17485..18471)
DNA (987bp) protein (329aa)
putative diacylglycerol kinase; K07029 id=7720265 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR76715.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
putative diacylglycerol kinase rbh
S10_scaffold_1015_curated_18
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18509..19771
DNA (1263bp) protein (421aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Serine--tRNA ligase n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XCF2_9MICO rbh
seryl-tRNA synthetase rbh
S10_scaffold_1015_curated_19
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19768..20568
DNA (801bp) protein (267aa)
Putative uncharacterized protein id=7720263 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EPR76713.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein rbh
Displaying 19 items

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