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S10_scaffold_709_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_709_curated_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..559)
DNA (558bp) protein (186aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
clpP; Clp protease (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B36A66 rbh
S10_scaffold_709_curated_2
Microbacterium arborescens, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(580..1170)
DNA (591bp) protein (197aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=33883 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium arborescens.;"
ATP-dependent Clp protease ClpP n=1 Tax=Humibacter albus RepID=UPI0003B732F2 rbh
clpP; protease subunit of ATP-dependent Clp protease rbh
S10_scaffold_709_curated_3
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1277..1765
DNA (489bp) protein (163aa)
TPR repeat id=7721797 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25520.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
TPR repeat
S10_scaffold_709_curated_4
unknown

Not on your lists

1810..1974
DNA (165bp) protein (55aa)
id=7721798 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria
S10_scaffold_709_curated_5
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1985..3190)
DNA (1206bp) protein (402aa)
cystathionine gamma-lyase n=1 Tax=Glaciibacter superstes RepID=UPI0003B58D93 rbh
cystathionine gamma-synthase rbh
Cystathionine gamma-synthase {ECO:0000313|EMBL:ACU96931.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
S10_scaffold_709_curated_6
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3243..4616)
DNA (1374bp) protein (458aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Trigger factor n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W2K5_9MICO rbh
tig; trigger factor rbh
S10_scaffold_709_curated_trna_2
unknown

Not on your lists

comp(4653..4726)
DNA (74bp)
transferRNA Pro
S10_scaffold_709_curated_7
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4821..6710)
DNA (1890bp) protein (630aa)
TrkA-N domain-containing protein id=7721795 bin=CNBR_ACT species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CNBR_ACT organism_group=Actinobacteria rbh
potassium transporter TrkA rbh
Tax=BJP_08E140C01_Actinomycetales_67_18
S10_scaffold_709_curated_trna_1
unknown

Not on your lists

6815..6885
DNA (71bp)
transferRNA Gly
S10_scaffold_709_curated_8
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7540..8427
DNA (888bp) protein (296aa)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Actinomyces massiliensis F0489 RepID=J0XEM8_9ACTO rbh
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:EJF47166.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
D12 class N6 adenine-specific DNA methyltransferase rbh
S10_scaffold_709_curated_9
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8363..10021)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PUI7_KRIFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB29505.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S10_scaffold_709_curated_10
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10215..11264
DNA (1050bp) protein (350aa)
Putative uncharacterized protein id=7721119 bin=CNBR_ACT species=unknown genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Membrane protein {ECO:0000313|EMBL:KJC62991.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
membrane protein
S10_scaffold_709_curated_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11274..11657)
DNA (384bp) protein (128aa)
glyoxalase/bleomycin resistance protein/dioxygenase id=7719368 bin=CNBR_ACT species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:ETK36697.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
glyoxalase
S10_scaffold_709_curated_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11682..12554)
DNA (873bp) protein (291aa)
lipase id=7721791 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Putative esterase {ECO:0000313|EMBL:EAR25523.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
alpha/beta hydrolase fold-3 domain-containing protein
S10_scaffold_709_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12564..12746)
DNA (183bp) protein (61aa)
Putative uncharacterized protein id=7721790 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR25524.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
S10_scaffold_709_curated_14
unknown

Not on your lists

12889..13050
DNA (162bp) protein (54aa)
id=7721789 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria
S10_scaffold_709_curated_15
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13072..13725)
DNA (654bp) protein (218aa)
two-component system response regulator id=7721787 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Putative two-component system response regulator {ECO:0000313|EMBL:EAR25526.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative two-component system response regulator
S10_scaffold_709_curated_16
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13739..15070)
DNA (1332bp) protein (444aa)
two-component system sensor kinase id=7721786 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Putative two-component system sensor kinase {ECO:0000313|EMBL:EAR25527.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative two-component system sensor kinase rbh
S10_scaffold_709_curated_17
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15253..15738
DNA (486bp) protein (162aa)
DNA-binding protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287F06E
Starvation-induced DNA-binding protein {ECO:0000313|EMBL:EAR25528.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
dpsA; putative stress induced DNA-binding protein
S10_scaffold_709_curated_18
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15742..16536)
DNA (795bp) protein (265aa)
Uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08XW2_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE70205.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
S10_scaffold_709_curated_19
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16547..17941)
DNA (1395bp) protein (465aa)
hypothetical protein; K07047 id=7721784 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Conserved protein, putative metal-dependent hydrolase {ECO:0000313|EMBL:EPR76929.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
amidohydrolase rbh
S10_scaffold_709_curated_20
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17928..18551)
DNA (624bp) protein (208aa)
Contig_99, whole genome shotgun sequence {ECO:0000313|EMBL:KIU02047.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
hypothetical protein; K07734 transcriptional regulator id=7721783 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
hypothetical protein
S10_scaffold_709_curated_21
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18556..19545)
DNA (990bp) protein (330aa)
DNA glycosylase id=7721782 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
DNA glycosylase {ECO:0000313|EMBL:EAR25531.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
formamidopyrimidine-DNA glycosylase rbh
S10_scaffold_709_curated_22
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19545..20033)
DNA (489bp) protein (163aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=7721781 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EAR25532.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EAR25532.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ribose-5-phosphate isomerase B
S10_scaffold_709_curated_23
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20099..20782
DNA (684bp) protein (228aa)
hypothetical protein id=7721780 bin=CNBR_ACT species=Kribbella flavida genus=Kribbella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPR75748.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_709_curated_24
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20815..23385
DNA (2571bp) protein (857aa)
pepN; aminopeptidase; K01256 aminopeptidase N [EC:3.4.11.2] id=7721778 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Membrane alanine aminopeptidase N {ECO:0000313|EMBL:EPR76925.1}; EC=3.4.11.2 {ECO:0000313|EMBL:EPR76925.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
aminopeptidase N rbh
S10_scaffold_709_curated_25
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23394..24443
DNA (1050bp) protein (350aa)
Potassium efflux system KefA protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XCY4_9MICO rbh
Potassium efflux system KefA protein {ECO:0000313|EMBL:EPR76924.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
mechanosensitive ion channel rbh
S10_scaffold_709_curated_26
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24440..24877
DNA (438bp) protein (146aa)
glbO; hemoglobin-like protein; K06886 hemoglobin id=7721776 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Globin {ECO:0000313|EMBL:KJC63494.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
glbO; hemoglobin-like protein
S10_scaffold_709_curated_27
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24885..25739)
DNA (855bp) protein (285aa)
nucleoside-diphosphate sugar epimerase id=7721775 bin=CNBR_ACT species=Sanguibacter keddieii genus=Sanguibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
NmrA family protein {ECO:0000313|EMBL:ERK72516.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
NAD-dependent epimerase/dehydratase rbh
S10_scaffold_709_curated_28
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25832..26194
DNA (363bp) protein (121aa)
HxlR family transcriptional regulator id=7721774 bin=CNBR_ACT species=Cellulomonas fimi genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Protein phosphatase 2C {ECO:0000313|EMBL:ERK72517.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
lipoprotein
Displaying items 1-30 of 33 in total

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