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S10_scaffold_310_curated

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_310_curated_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..646)
DNA (645bp) protein (215aa)
Apolipoprotein N-acyltransferase {ECO:0000256|SAAS:SAAS00250216}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00088950};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
lnt; hypothetical protein (EC:2.3.1.-)
apolipoprotein N-acyltransferase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288650B
S10_scaffold_310_curated_2
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(667..3096)
DNA (2430bp) protein (810aa)
ATP-dependent RNA helicase; K03727 ATP-dependent RNA helicase HelY [EC:3.6.4.-] id=7721172 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Putative helicase {ECO:0000313|EMBL:EPR75592.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
ATP-dependent RNA helicase rbh
S10_scaffold_310_curated_3
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3107..3853)
DNA (747bp) protein (249aa)
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
tatC; sec-independent protein translocase protein TatC; K03118 sec-independent protein translocase protein TatC id=7721171 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
tatC; Sec-independent twin-arginine protein translocase rbh
S10_scaffold_310_curated_4
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3904..4146)
DNA (243bp) protein (81aa)
preprotein translocase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002889704
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
S10_scaffold_310_curated_5
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4244..4606)
DNA (363bp) protein (121aa)
hypothetical protein SPAM21_01140 id=7721169 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPR75596.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
inosine 5-monophosphate dehydrogenase
S10_scaffold_310_curated_6
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4609..5586)
DNA (978bp) protein (326aa)
DeoR family transcriptional regulator; K13573 proteasome accessory factor C id=7721168 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK71688.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
DeoR family transcriptional regulator rbh
S10_scaffold_310_curated_7
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5579..6568)
DNA (990bp) protein (330aa)
putative transcriptional regulator; K13572 proteasome accessory factor B id=7721167 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Transcriptional regulator {ECO:0000313|EMBL:KDP90120.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
putative transcriptional regulator rbh
S10_scaffold_310_curated_8
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6619..7521)
DNA (903bp) protein (301aa)
fkpA; peptidylprolyl isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=7721166 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Peptidylprolyl isomerase {ECO:0000313|EMBL:EPR75599.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
peptidylprolyl isomerase
S10_scaffold_310_curated_9
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7562..8557)
DNA (996bp) protein (332aa)
gcd14; tRNA(1-methyladenosine) methyltransferase; K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=7721165 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:EAR24095.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
SAM-dependent methyltransferase rbh
S10_scaffold_310_curated_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8554..9225)
DNA (672bp) protein (224aa)
hydrolase id=7721164 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Hydrolase {ECO:0000313|EMBL:EAR24096.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative phosphatase
S10_scaffold_310_curated_11
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9256..10194
DNA (939bp) protein (313aa)
hypothetical protein id=7721163 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR24097.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
S10_scaffold_310_curated_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10207..11061)
DNA (855bp) protein (285aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
UDP pyrophosphate phosphatase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288B1F6 rbh
bacitracin resistance protein rbh
S10_scaffold_310_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11090..12394)
DNA (1305bp) protein (435aa)
hypothetical protein id=7721158 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR24099.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
succinyl-diaminopimelate desuccinylase rbh
S10_scaffold_310_curated_trna_1
unknown

Not on your lists

12459..12543
DNA (85bp)
transferRNA Leu
S10_scaffold_310_curated_14
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12593..13294)
DNA (702bp) protein (234aa)
exonuclease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002887CB4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR24103.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
endonuclease/exonuclease/phosphatase family protein
S10_scaffold_310_curated_15
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13341..14600)
DNA (1260bp) protein (420aa)
transporter n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI0002FE75F6 rbh
Transporter {ECO:0000313|EMBL:KGH47188.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
putative amino acid permease
S10_scaffold_310_curated_16
unknown

Not on your lists

14734..14886
DNA (153bp) protein (51aa)

This feature has no annotations

S10_scaffold_310_curated_17
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14902..15813)
DNA (912bp) protein (304aa)
molecular chaperone DnaJ id=7721149 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Molecular chaperone DnaJ {ECO:0000313|EMBL:KDA05094.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
molecular chaperone DnaJ rbh
S10_scaffold_310_curated_18
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15875..16357
DNA (483bp) protein (161aa)
glutathione peroxidase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037FB292
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
glutathione peroxidase
S10_scaffold_310_curated_19
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16354..16638
DNA (285bp) protein (95aa)
acetyltransferase; K06975 id=7721143 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR24107.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_310_curated_20
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16638..17315
DNA (678bp) protein (226aa)
fructose-2,6-bisphosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] id=7721146 bin=CNBR_ACT species=Arthrobacter globiformis genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
phosphoglycerate mutase family protein
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:AFR30914.1}; TaxID=1118963 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
S10_scaffold_310_curated_21
unknown

Not on your lists

comp(17328..17849)
DNA (522bp) protein (174aa)

This feature has no annotations

S10_scaffold_310_curated_22
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17859..18599)
DNA (741bp) protein (247aa)
Putative uncharacterized protein id=7722270 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR24114.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
S10_scaffold_310_curated_23
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18596..19921)
DNA (1326bp) protein (442aa)
FAD-linked oxidase n=1 Tax=Glaciibacter superstes RepID=UPI0003B36964 rbh
FAD linked oxidase domain-containing protein rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADB31118.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
S10_scaffold_310_curated_24
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19960..20613
DNA (654bp) protein (218aa)
hypothetical protein id=7719735 bin=CNBR_ACT species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KJC63167.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
hypothetical protein
S10_scaffold_310_curated_25
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20610..20999)
DNA (390bp) protein (130aa)
hypothetical protein id=7722266 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR24116.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_310_curated_26
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21037..21699
DNA (663bp) protein (221aa)
hypothetical protein id=7722265 bin=CNBR_ACT species=Streptomyces ipomoeae genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative LysR-family trancsriptional regulator {ECO:0000313|EMBL:EAR24117.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
transcriptional regulator
S10_scaffold_310_curated_27
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21686..22111)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JS12_ARTS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ79611.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
S10_scaffold_310_curated_28
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22149..22493)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347F7AB
Uncharacterized protein {ECO:0000313|EMBL:EYT59388.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
S10_scaffold_310_curated_29
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22559..23278
DNA (720bp) protein (240aa)
hypothetical protein id=7722257 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR24121.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
Displaying items 1-30 of 67 in total

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