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S10_scaffold_636_curated

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_636_curated_1
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..760)
DNA (759bp) protein (253aa)
recombination protein F id=7720411 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
recF; DNA recombination protein F rbh
S10_scaffold_636_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(766..1650)
DNA (885bp) protein (295aa)
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:EAR26164.1}; EC=1.1.1.44 {ECO:0000313|EMBL:EAR26164.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
6-phosphogluconate dehydrogenase, decarboxylating id=7720412 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
6-phosphogluconate dehydrogenase rbh
S10_scaffold_636_curated_3
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1674..2819)
DNA (1146bp) protein (382aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7) rbh
DNA polymerase III subunit beta id=7720413 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_636_curated_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3152..4558)
DNA (1407bp) protein (469aa)
Chromosomal replication initiator protein DnaA id=7720414 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
dnaA; chromosomal replication initiation protein rbh
S10_scaffold_636_curated_5
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


4833..4970
DNA (138bp) protein (46aa)
50S ribosomal protein L34 id=7720415 bin=CNBR_ACT species=unknown genus=unknown taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
S10_scaffold_636_curated_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5317..5628
DNA (312bp) protein (104aa)
Putative membrane protein insertion efficiency factor id=7720416 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_636_curated_7
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5637..6596
DNA (960bp) protein (320aa)
Inner membrane protein translocase component YidC, long form n=1 Tax=Leifsonia rubra CMS 76R RepID=S7VY57_9MICO rbh
Inner membrane protein translocase component YidC, long form {ECO:0000313|EMBL:EPR75086.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
putative inner membrane protein translocase component YidC rbh
S10_scaffold_636_curated_8
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6602..7120
DNA (519bp) protein (173aa)
Putative uncharacterized protein id=7720418 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR26158.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative DNA binding protein
S10_scaffold_636_curated_9
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8047..8676
DNA (630bp) protein (210aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Ribosomal RNA small subunit methyltransferase G id=7720419 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
gidB; 16S rRNA methyltransferase GidB
S10_scaffold_636_curated_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8729..9646
DNA (918bp) protein (306aa)
Chromosome partitioning protein id=7720420 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Chromosome partitioning protein {ECO:0000313|EMBL:EAR26156.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
parA; chromosome partitioning protein rbh
S10_scaffold_636_curated_11
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9646..10602
DNA (957bp) protein (319aa)
Chromosome partitioning protein id=7720421 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Chromosome partitioning protein {ECO:0000313|EMBL:EAR26155.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
parB; chromosome partitioning protein rbh
S10_scaffold_636_curated_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10709..11665)
DNA (957bp) protein (319aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
ddlB; putative D-alanine-D-alanine ligase (EC:6.3.2.4) rbh
D-alanine--D-alanine ligase id=7720422 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_636_curated_13
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11672..12976)
DNA (1305bp) protein (435aa)
Valine-pyruvate aminotransferase id=7720423 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Valine-pyruvate aminotransferase {ECO:0000313|EMBL:EAR26152.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
valine-pyruvate aminotransferase rbh
S10_scaffold_636_curated_14
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13109..13435)
DNA (327bp) protein (109aa)
Thioredoxin id=7720424 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
thioredoxin
S10_scaffold_636_curated_15
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13465..14430)
DNA (966bp) protein (322aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
trxB1; putative thioredoxin reductase (EC:1.8.1.9) rbh
Thioredoxin reductase id=7720425 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_636_curated_16
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14490..16118)
DNA (1629bp) protein (543aa)
Putative uncharacterized protein id=7720426 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Putative peptidoglycan lipid II flippase MurJ {ECO:0000313|EMBL:EPR75096.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
mviN; hypothetical protein rbh
S10_scaffold_636_curated_17
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16115..17788)
DNA (1674bp) protein (558aa)
Membrane protein id=7720427 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR75097.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein rbh
S10_scaffold_636_curated_18
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17853..19271
DNA (1419bp) protein (473aa)
RNA nucleotidyltransferase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288080D rbh
Poly(A) polymerase {ECO:0000313|EMBL:EAR26146.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
pcnB; poly(A) polymerase rbh
S10_scaffold_636_curated_19
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


19385..19867
DNA (483bp) protein (161aa)
30S ribosomal protein S6 n=1 Tax=Leifsonia rubra CMS 76R RepID=S7X7T2_9MICO
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
rpsF; 30S ribosomal protein S6
S10_scaffold_636_curated_20
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19871..20374
DNA (504bp) protein (168aa)
Single-stranded DNA-binding protein id=7720432 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
single-stranded DNA-binding protein
S10_scaffold_636_curated_21
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20440..20703
DNA (264bp) protein (88aa)
30S ribosomal protein S18 id=7720433 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
30S ribosomal protein S18
S10_scaffold_636_curated_22
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


20715..21167
DNA (453bp) protein (151aa)
50S ribosomal protein L9 id=7720434 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
rplI; 50S ribosomal protein L9
S10_scaffold_636_curated_23
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21616..22998
DNA (1383bp) protein (461aa)
dnaB; replicative DNA helicase (EC:3.1.-.-) rbh
Replicative DNA helicase id=7720435 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Replicative DNA helicase {ECO:0000313|EMBL:EAR26141.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
S10_scaffold_636_curated_24
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23006..23725)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nocardia sp. BMG111209 RepID=UPI000365555F
Uncharacterized protein {ECO:0000313|EMBL:KHK95556.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
TetR family transcriptional regulator
S10_scaffold_636_curated_25
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23777..24409
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5U6S9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHK95555.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
S10_scaffold_636_curated_26
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24476..25114
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AET9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EAR26140.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_636_curated_27
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25111..25368
DNA (258bp) protein (86aa)
Putative uncharacterized protein id=7720437 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR26139.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_636_curated_28
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25527..26909)
DNA (1383bp) protein (461aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:EAR26138.1}; EC=4.3.2.2 {ECO:0000313|EMBL:EAR26138.1};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
Adenylosuccinate lyase id=7720438 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
adenylosuccinate lyase rbh
S10_scaffold_636_curated_29
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26906..27430)
DNA (525bp) protein (175aa)
hypothetical protein (EC:3.1.3.48)
Putative low molecular weight protein tyrosine phosphatase id=7720439 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative low molecular weight protein tyrosine phosphatase {ECO:0000313|EMBL:EAR26137.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
S10_scaffold_636_curated_30
unknown

Not on your lists

27542..27799
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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