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S10_scaffold_1050_curated

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1050_curated_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..260)
DNA (258bp) protein (86aa)
aceF; putative pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] id=7722048 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Biotin-requiring enzyme {ECO:0000313|EMBL:ERK73028.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
pdhB; dihydrolipoamide acetyltransferase
S10_scaffold_1050_curated_2
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(322..1695)
DNA (1374bp) protein (458aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4); K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=7722049 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4) rbh
S10_scaffold_1050_curated_3
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1794..3278)
DNA (1485bp) protein (495aa)
pep; leucyl aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1] id=7722050 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
pepA; leucine aminopeptidase, metallopeptidase family M17 (EC:3.4.11.10) rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
S10_scaffold_1050_curated_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3360..4283
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4ALR1_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR23752.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
S10_scaffold_1050_curated_5
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4321..5649
DNA (1329bp) protein (443aa)
putative MFS permease id=7722052 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK69662.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
major facilitator superfamily permease rbh
S10_scaffold_1050_curated_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5793..7196
DNA (1404bp) protein (468aa)
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); K03086 RNA polymerase primary sigma factor id=7722053 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) rbh
S10_scaffold_1050_curated_7
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7278..8474
DNA (1197bp) protein (399aa)
ligase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035F6268 rbh
murC; UDP-N-acetylmuramyl tripeptide synthetase rbh
UDP-N-acetylmuramyl tripeptide synthetase {ECO:0000313|EMBL:AAT88887.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
S10_scaffold_1050_curated_8
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8471..9130
DNA (660bp) protein (220aa)
Cobyric acid synthase n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6AFF7_LEIXX
cobQ; cobyric acid synthase
Cobyric acid synthase {ECO:0000313|EMBL:AAT88888.1}; TaxID=281090 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. xyli (strain CTCB07).;"
S10_scaffold_1050_curated_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9144..10190)
DNA (1047bp) protein (349aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
Alanine racemase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TE64_LEIAQ rbh
alr; alanine racemase rbh
S10_scaffold_1050_curated_10
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10187..10882)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036017C4
Putative alanine racemase {ECO:0000313|EMBL:ERK72961.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
alr; alanine racemase
S10_scaffold_1050_curated_11
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10898..11131)
DNA (234bp) protein (78aa)
hypothetical protein id=7722058 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:EAR23748.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein
S10_scaffold_1050_curated_12
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11306..13384
DNA (2079bp) protein (693aa)
gyrB; DNA topoisomerase IV subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] id=7722059 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
DNA gyrase subunit B {ECO:0000313|EMBL:EAR23747.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
DNA topoisomerase IV subunit B rbh
S10_scaffold_1050_curated_13
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13419..14942
DNA (1524bp) protein (508aa)
lipT; carboxylesterase (EC:3.1.1.1); K03929 para-nitrobenzyl esterase [EC:3.1.1.-] id=7722061 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
lipT; carboxylesterase (EC:3.1.1.1) rbh
S10_scaffold_1050_curated_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15081..15692
DNA (612bp) protein (204aa)
AzlC family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRI3_PSEUX
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:AEA26191.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
S10_scaffold_1050_curated_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15685..16017
DNA (333bp) protein (111aa)
Branched-chain amino acid transport n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRI2_PSEUX
branched-chain amino acid transport
Branched-chain amino acid transport {ECO:0000313|EMBL:AEA26190.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
S10_scaffold_1050_curated_16
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16037..18490)
DNA (2454bp) protein (818aa)
DNA topoisomerase IV subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=7722062 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
putative topoisomerase II, subunit A (EC:5.99.1.3) rbh
S10_scaffold_1050_curated_17
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18503..19627
DNA (1125bp) protein (375aa)
Alkaline phosphodiesterase I {ECO:0000313|EMBL:EPR76096.1}; EC=3.1.4.1 {ECO:0000313|EMBL:EPR76096.1};; EC=3.6.1.9 {ECO:0000313|EMBL:EPR76096.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein id=7722063 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
hypothetical protein rbh
S10_scaffold_1050_curated_18
Dermabacter hominis, Dermabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19631..19720)
DNA (90bp) protein (30aa)
Integrase, catalytic region n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GGW9_PROFC
Integrase {ECO:0000313|EMBL:KDS92713.1}; Flags: Fragment;; TaxID=1450519 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Dermabacter.;" source="Dermabacter hominis 1368.;"
int; integrase
Displaying 18 items

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