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S10_scaffold_1053_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S10_scaffold_1053_curated_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..304)
DNA (303bp) protein (101aa)
Transcriptional regulator, MarR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B0X5_STRRD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACZ83382.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
S10_scaffold_1053_curated_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(348..2591)
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI000362B0EF
conserved repeat domain protein
Conserved repeat domain protein {ECO:0000313|EMBL:ACS22514.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
S10_scaffold_1053_curated_3
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2899..3771
DNA (873bp) protein (291aa)
Glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein id=7720555 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein {ECO:0000313|EMBL:EAR25902.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
lyase rbh
S10_scaffold_1053_curated_4
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3778..4788)
DNA (1011bp) protein (337aa)
Penicillin-binding protein id=7720551 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
Penicillin-binding protein {ECO:0000313|EMBL:EAR25904.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
penicillin-binding protein rbh
S10_scaffold_1053_curated_5
actinobacterium acMicro-4, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4846..5586
DNA (741bp) protein (247aa)
UPI0002626A11 related cluster id=7720547 bin=CNBR_ACT species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA04708.1}; TaxID=1504317 species="Bacteria; Actinobacteria.;" source="actinobacterium acMicro-4.;"
SGNH hydrolase
S10_scaffold_1053_curated_6
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5558..6760)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AG00_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR25906.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
major facilitator transporter rbh
S10_scaffold_1053_curated_7
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6844..7443
DNA (600bp) protein (200aa)
Putative uncharacterized protein id=7720546 bin=CNBR_ACT species=unknown genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
panthothenate kinase
Panthothenate kinase {ECO:0000313|EMBL:ACZ22828.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
S10_scaffold_1053_curated_8
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7469..7762
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FT72_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ28804.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
S10_scaffold_1053_curated_9
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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7759..8172
DNA (414bp) protein (138aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
hypothetical protein n=1 Tax=Saccharomonospora saliphila RepID=UPI0003625446
PilT protein domain-containing protein
S10_scaffold_1053_curated_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8215..8514
DNA (300bp) protein (100aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM; 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).;"
phosphoribosylformylglycinamidine synthase n=1 Tax=Glaciibacter superstes RepID=UPI0003B67284
hypothetical protein
S10_scaffold_1053_curated_11
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8517..9218
DNA (702bp) protein (234aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
purQ; phosphoribosylformylglycinamidine synthase subunit (EC:6.3.5.3) rbh
phosphoribosylformylglycinamidine synthase n=1 Tax=Glaciibacter superstes RepID=UPI0003B51537 rbh
S10_scaffold_1053_curated_12
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9268..9735
DNA (468bp) protein (156aa)
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase {ECO:0000313|EMBL:EPR77442.1}; EC=1.8.1.8 {ECO:0000313|EMBL:EPR77442.1};; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein SPAM21_07248 id=7720536 bin=CNBR_ACT species=Salinibacterium sp. PAMC 21357 genus=Salinibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
S10_scaffold_1053_curated_13
unknown

Not on your lists

comp(9758..10375)
DNA (618bp) protein (206aa)

This feature has no annotations

S10_scaffold_1053_curated_14
unknown

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comp(10372..10842)
DNA (471bp) protein (157aa)

This feature has no annotations

S10_scaffold_1053_curated_15
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10873..11733)
DNA (861bp) protein (287aa)
Abortive infection protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XN92_9MICO rbh
Abortive infection protein {ECO:0000313|EMBL:EPR77443.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
Abortive infection protein rbh
S10_scaffold_1053_curated_16
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11746..12921)
DNA (1176bp) protein (392aa)
mechanosensitive ion channel protein MscS n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287BEC3 rbh
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EAR25911.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
S10_scaffold_1053_curated_17
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13024..14412
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AG06_9ACTN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR25912.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
hypothetical protein rbh
S10_scaffold_1053_curated_18
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14422..16707
DNA (2286bp) protein (762aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3) rbh
Phosphoribosylformylglycinamidine synthase 2 id=7720535 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
S10_scaffold_1053_curated_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17043..17687
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RFK6_LEIAQ
Uncharacterized protein {ECO:0000313|EMBL:ERK67631.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
hypothetical protein
S10_scaffold_1053_curated_20
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18234..19604)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI00035D7D6F
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ83426.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Displaying 20 items

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