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S12_scaffold_573_curated

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_573_curated_1
unknown

Not on your lists

1..75
DNA (75bp) protein (25aa)

This feature has no annotations

S12_scaffold_573_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296..571
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC64713.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
S12_scaffold_573_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

853..1062
DNA (210bp) protein (70aa)
Putative cold shock protein y4cH n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F962_9RHIZ
Cold shock protein {ECO:0000313|EMBL:KFC74766.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cold-shock DNA-binding domain-containing protein
S12_scaffold_573_curated_4
unknown

Not on your lists

1180..1413
DNA (234bp) protein (78aa)

This feature has no annotations

S12_scaffold_573_curated_5
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1423..1626)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U2B8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ01718.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
hypothetical protein
S12_scaffold_573_curated_6
unknown

Not on your lists

comp(1623..1844)
DNA (222bp) protein (74aa)

This feature has no annotations

S12_scaffold_573_curated_7
unknown

Not on your lists

comp(1880..2089)
DNA (210bp) protein (70aa)

This feature has no annotations

S12_scaffold_573_curated_8
unknown

Not on your lists

comp(2097..2342)
DNA (246bp) protein (82aa)

This feature has no annotations

S12_scaffold_573_curated_9
unknown

Not on your lists

comp(2404..2688)
DNA (285bp) protein (95aa)

This feature has no annotations

S12_scaffold_573_curated_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2773..3678)
DNA (906bp) protein (302aa)
transposase IS401 n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00037AC30C rbh
Transposase {ECO:0000313|EMBL:GAN78020.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
integrase catalytic subunit rbh
S12_scaffold_573_curated_11
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3675..4004)
DNA (330bp) protein (110aa)
transposase n=1 Tax=Xanthobacteraceae RepID=UPI00037391E4
Transposase {ECO:0000313|EMBL:KJC36718.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
S12_scaffold_573_curated_12
CG_Rhodob_01, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4045..4272
DNA (228bp) protein (76aa)
Putative transposase protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P2N7_9RHOB
transposase-related protein
Tax=CG_Rhodob_01
S12_scaffold_573_curated_13
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4519..7839
DNA (3321bp) protein (1107aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037ED911 rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIM26738.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
diguanylate cyclase rbh
S12_scaffold_573_curated_14
unknown

Not on your lists

comp(8104..8226)
DNA (123bp) protein (41aa)
ATPase AAA n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002884FA0
S12_scaffold_573_curated_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8297..10399)
DNA (2103bp) protein (701aa)
Transposase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q989Z6_RHILO rbh
transposase rbh
Transposase {ECO:0000313|EMBL:BAB52548.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S12_scaffold_573_curated_16
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10874..11269)
DNA (396bp) protein (132aa)
Transposase of ISMdi7, IS21 family (ORF 2) n=2 Tax=Methylobacterium extorquens RepID=C7CFB0_METED
transposase of ISMdi7, IS21 family (ORF 2)
Transposase of ISMdi7, IS21 family (ORF 2) {ECO:0000313|EMBL:CAX26044.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
S12_scaffold_573_curated_17
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11522..12367)
DNA (846bp) protein (282aa)
Oligopeptide transport ATP-binding protein AppF n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CSS4_9RHOB rbh
Oligopeptide transport ATP-binding protein AppF {ECO:0000313|EMBL:EEW60869.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter sp. TrichCH4B.;"
ABC transporter-like protein rbh
S12_scaffold_573_curated_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12351..13337)
DNA (987bp) protein (329aa)
Dipeptide ABC transporter, ATP-binding component n=1 Tax=Oceanibaculum indicum P24 RepID=K2J6X5_9PROT rbh
Dipeptide ABC transporter, ATP-binding component {ECO:0000313|EMBL:EKE78831.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
dppD; dipeptide ABC transporter atp-binding domain rbh
S12_scaffold_573_curated_19
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13334..14218)
DNA (885bp) protein (295aa)
UPI0003CF7356 related cluster n=1 Tax=unknown RepID=UPI0003CF7356 rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:ESW63453.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
binding-protein-dependent transporter inner membrane component
S12_scaffold_573_curated_20
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14202..15134)
DNA (933bp) protein (311aa)
UPI0003CE2F9B related cluster n=1 Tax=unknown RepID=UPI0003CE2F9B rbh
ABC transporter permease {ECO:0000313|EMBL:ESW63454.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
binding-protein-dependent transporter inner membrane component
S12_scaffold_573_curated_21
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15206..16255)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI000365D9E9
multidrug resistance protein B
Tax=BJP_IG2069_Anaerolineales_43_63
S12_scaffold_573_curated_22
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16263..17780)
DNA (1518bp) protein (506aa)
Extracellular solute-binding protein, family 5 middle family protein 17 n=1 Tax=Achromobacter piechaudii HLE RepID=J4J716_9BURK rbh
Extracellular solute-binding protein, family 5 middle family protein 17 {ECO:0000313|EMBL:EJO29894.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
extracellular solute-binding protein, family 5 middle family protein 17 rbh
S12_scaffold_573_curated_23
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17841..18671)
DNA (831bp) protein (277aa)
UPF0317 protein Xaut_1503 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=Y1503_XANP2 rbh
hypothetical protein rbh
UPF0317 protein Xaut_1503 {ECO:0000255|HAMAP-Rule:MF_01830}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_573_curated_24
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18867..19793)
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFG2_XANP2 rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABS66755.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_573_curated_25
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20174..20383)
DNA (210bp) protein (70aa)
transposase n=1 Tax=Xanthobacteraceae RepID=UPI0003680AC6
Transposase {ECO:0000313|EMBL:KGE79600.1}; Flags: Fragment;; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
S12_scaffold_573_curated_26
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20599..21198
DNA (600bp) protein (200aa)
ISHne5, transposase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NWL4_9RHOB
ISHne5, transposase {ECO:0000313|EMBL:EEE36038.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.;"
putative IS110-family transposase
S12_scaffold_573_curated_27
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21245..21523
DNA (279bp) protein (93aa)
Transposase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX79_9RHIZ
Transposase {ECO:0000313|EMBL:EIM28571.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
transposase IS3/IS911 family protein
S12_scaffold_573_curated_28
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21598..22425
DNA (828bp) protein (276aa)
integrase n=1 Tax=Aureimonas ureilytica RepID=UPI000378E879 rbh
Integrase catalytic region {ECO:0000313|EMBL:EHP72637.1}; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
integrase catalytic subunit rbh
S12_scaffold_573_curated_29
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22457..22696)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UFM9_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA15738.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
S12_scaffold_573_curated_30
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22683..23309)
DNA (627bp) protein (209aa)
Acetyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J2QYI6_9RHIZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EUB95072.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
GCN5-like N-acetyltransferase
Displaying items 1-30 of 65 in total

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