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S12_scaffold_31_curated

Search features with annotation key words

Displaying items 1-30 of 260 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_31_curated_1
unknown

Not on your lists

comp(206..649)
DNA (444bp) protein (148aa)

This feature has no annotations

S12_scaffold_31_curated_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(663..1898)
DNA (1236bp) protein (412aa)
ABC-type Na+ efflux pump, permease component id=3145858 bin=GWF2_Firmicute_51_9 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
natB; Na+ efflux pump ABC transporter permease rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_31_curated_3
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(1891..2805)
DNA (915bp) protein (305aa)
Putative uncharacterized protein id=3145857 bin=GWF2_Firmicute_51_9 species=Helcococcus kunzii genus=Helcococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
ABC transporter ATP-binding protein rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_31_curated_4
Geomicrobium sp. JCM 19037, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3093..4430
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JPL2_TRESO
Uncharacterized protein {ECO:0000313|EMBL:GAK05871.1}; TaxID=1460634 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19037.;"
S12_scaffold_31_curated_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4427..4999
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R9P0_THETN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24770.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
S12_scaffold_31_curated_6
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5258..6475)
DNA (1218bp) protein (406aa)
htpX; Protease HtpX (EC:3.4.24.-)
Peptidase M48 n=3 Tax=Youngiibacter RepID=V7I7L8_9CLOT rbh
Peptidase M48 {ECO:0000313|EMBL:ETA81229.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
S12_scaffold_31_curated_7
unknown

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comp(6472..7551)
DNA (1080bp) protein (360aa)

This feature has no annotations

S12_scaffold_31_curated_8
unknown

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7735..8028
DNA (294bp) protein (98aa)

This feature has no annotations

S12_scaffold_31_curated_9
unknown

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8112..8753
DNA (642bp) protein (214aa)

This feature has no annotations

S12_scaffold_31_curated_10
unknown

Not on your lists

8876..9400
DNA (525bp) protein (175aa)

This feature has no annotations

S12_scaffold_31_curated_11
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9441..11234
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D5DB94
YARHG domain/zinc-ribbon domain
Basic protein (Putative) {ECO:0000313|EMBL:CAA82932.1}; Flags: Fragment;; TaxID=1501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum.;"
S12_scaffold_31_curated_12

Not on your lists

11454..11765
DNA (312bp) protein (104aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SLR1_9ZZZZ
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:EKC56349.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
S12_scaffold_31_curated_13
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

12020..12874
DNA (855bp) protein (285aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KIY9_9FIRM
DNA-binding domain-containing protein, AraC-type
Tax=BJP_IG2103_Bacteroidetes_37_22
S12_scaffold_31_curated_14
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

12953..13828
DNA (876bp) protein (292aa)
Esterase n=1 Tax=uncultured bacterium RepID=C5H0A6_9BACT
alpha/beta hydrolase
Tax=BJP_IG2103_Bacteroidetes_37_22
S12_scaffold_31_curated_15
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13862..14062
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W9G7_DESOD
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
S12_scaffold_31_curated_16
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14083..14925
DNA (843bp) protein (281aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FHS5_9CLOT
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EMS71072.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
S12_scaffold_31_curated_17
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14945..15520
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q252I3_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE81809.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
S12_scaffold_31_curated_18
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15573..16178
DNA (606bp) protein (202aa)
Nitroreductase id=2108125 bin=GWE2_Firmicute_51_13 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AET66515.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
S12_scaffold_31_curated_19
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

Not on your lists

16162..16905
DNA (744bp) protein (248aa)
id=2426216 bin=GWF1_Tenericute_35_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
hypothetical protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
S12_scaffold_31_curated_20
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(16926..17609)
DNA (684bp) protein (228aa)
DNA-binding protein id=2189210 bin=GWE2_Firmicute_51_13 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
immR_4; HTH-type transcriptional regulator ImmR
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_31_curated_21
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17923..19317
DNA (1395bp) protein (465aa)
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:EOD01115.1}; EC=1.8.1.4 {ECO:0000313|EMBL:EOD01115.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Dihydrolipoamide dehydrogenase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CFN2_9CLOT rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
S12_scaffold_31_curated_22
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19513..20637
DNA (1125bp) protein (375aa)
DNA alkylation repair enzyme n=1 Tax=Pseudomonas fluorescens F113 RepID=G8QAK5_PSEFL
DNA alkylation repair protein {ECO:0000313|EMBL:KHK66231.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;"
DNA alkylation repair protein
S12_scaffold_31_curated_23
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20641..21246)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248C8F9
Uncharacterized protein {ECO:0000313|EMBL:KEQ23640.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
hypothetical protein
S12_scaffold_31_curated_24
Bacillus manliponensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21243..21797)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00037AC3CE
Uncharacterized protein {ECO:0000313|EMBL:KEK19254.1}; TaxID=574376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus manliponensis.;"
hypothetical protein
S12_scaffold_31_curated_25
unknown

Not on your lists

21933..22487
DNA (555bp) protein (185aa)

This feature has no annotations

S12_scaffold_31_curated_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22953..23726
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKK1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58030.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
DeoR family transcriptional regulator
S12_scaffold_31_curated_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23738..24199
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58029.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
PTS family fructose/mannitol porter component IIA
S12_scaffold_31_curated_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24196..25281
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKJ9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHI58028.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
peptidase M42 family protein rbh
S12_scaffold_31_curated_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25278..25559
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58027.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
PTS galactitol transporter subunit IIB
S12_scaffold_31_curated_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25572..26915
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IKJ7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EHI58026.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
PTS system galactitol-specific transporter subunit IIC rbh
Displaying items 1-30 of 260 in total

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