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S12_scaffold_110_curated

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_110_curated_1
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1..405)
DNA (405bp) protein (135aa)
Beta-lactamase domain protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RRR7_SPHGB
beta-lactamase
Tax=BJP_08E140C01_Spirochaeta_53_29
S12_scaffold_110_curated_2
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(750..2075)
DNA (1326bp) protein (442aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F8A9_9FIRM rbh
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFE46606.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
RNA methyltransferase
S12_scaffold_110_curated_3
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(2103..2720)
DNA (618bp) protein (206aa)
Putative uncharacterized protein id=1846410 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_4
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2774..4198)
DNA (1425bp) protein (475aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R8Z5_9FIRM rbh
gatB; glutamyl-tRNA(Gln) amidotransferase subunit B rbh
S12_scaffold_110_curated_5
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4195..5607)
DNA (1413bp) protein (471aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.6 6.3.5.7 6.3.5.-) rbh
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BN59_9FIRM rbh
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit {ECO:0000313|EMBL:EHO82564.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
S12_scaffold_110_curated_6
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5607..5903)
DNA (297bp) protein (99aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit {ECO:0000313|EMBL:EFW24130.1}; EC=6.3.5.- {ECO:0000313|EMBL:EFW24130.1};; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7 6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit n=1 Tax=Solobacterium moorei F0204 RepID=E7MNU9_9FIRM
S12_scaffold_110_curated_7
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(5913..6998)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein id=1846361 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
CamS sex pheromone cAM373 family protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6988..8982)
DNA (1995bp) protein (665aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
DNA ligase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YE26_9FIRM rbh
ligA; NAD-dependent DNA ligase LigA rbh
S12_scaffold_110_curated_9
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(8979..11135)
DNA (2157bp) protein (719aa)
Putative uncharacterized protein id=1846352 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
pcrA; ATP-dependent DNA helicase PcrA rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11227..12099
DNA (873bp) protein (291aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRC2_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EFR38718.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein rbh
S12_scaffold_110_curated_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12087..12737
DNA (651bp) protein (217aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EEF65764.1}; EC=5.4.99.- {ECO:0000313|EMBL:EEF65764.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
RNA pseudouridine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YE32_9FIRM
pseudouridine synthase
S12_scaffold_110_curated_12
unknown

Not on your lists

comp(12818..13153)
DNA (336bp) protein (112aa)

This feature has no annotations

S12_scaffold_110_curated_13
unknown

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comp(13346..14911)
DNA (1566bp) protein (522aa)

This feature has no annotations

S12_scaffold_110_curated_14
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15123..15539)
DNA (417bp) protein (139aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY75758.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
S12_scaffold_110_curated_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15569..16327)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FN31_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDG02009.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
exodeoxyribonuclease III Xth rbh
S12_scaffold_110_curated_16
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(16331..17188)
DNA (858bp) protein (286aa)
Putative uncharacterized protein id=4114578 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
patatin-like phospholipase
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_17
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(17197..18723)
DNA (1527bp) protein (509aa)
cls; cardiolipin synthetase (EC:2.7.8.-) rbh
Cardiolipin synthase id=4114577 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18742..19527)
DNA (786bp) protein (262aa)
Histidinol phosphate phosphatase HisJ family protein n=3 Tax=Erysipelotrichaceae RepID=C3RKZ4_9FIRM
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:EHM90458.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
histidinol phosphate phosphatase
S12_scaffold_110_curated_19
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19514..20362)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00037F10B2
HAD-superfamily hydrolase, subfamily IIB
Cof-like hydrolase {ECO:0000313|EMBL:EWC93721.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
S12_scaffold_110_curated_20
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(20462..20908)
DNA (447bp) protein (149aa)
putative acetyltransferase (EC:4.1.2.40)
Putative uncharacterized protein id=1846323 bin=GWE2_Firmicute_51_13 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20905..22020)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STW3_CLOPS rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG87783.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
S12_scaffold_110_curated_22
BJP_IG2069_Synergistales_47_25, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(22008..23003)
DNA (996bp) protein (332aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLZ2_ALKOO rbh
Rieske (2Fe-2S) domain-containing protein rbh
Tax=BJP_IG2069_Synergistales_47_25
S12_scaffold_110_curated_23
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23131..23961
DNA (831bp) protein (277aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CPT9_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI92534.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
AraC family transcriptional regulator
S12_scaffold_110_curated_24
unknown

Not on your lists

24008..24229
DNA (222bp) protein (74aa)

This feature has no annotations

S12_scaffold_110_curated_25
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(24271..24531)
DNA (261bp) protein (87aa)
Glutaredoxin id=1846321 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
glutaredoxin
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_26
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24560..25357)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XG60_CALS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP65895.1}; Flags: Precursor;; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
S12_scaffold_110_curated_27
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(25396..25590)
DNA (195bp) protein (65aa)
id=1765597 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_28
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(25609..26334)
DNA (726bp) protein (242aa)
ABC transporter permease id=1765594 bin=GWE2_Firmicute_51_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Fluoroquinolones export permease protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_29
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(26337..27065)
DNA (729bp) protein (243aa)
ABC-type transport system, permease component id=1765591 bin=GWE2_Firmicute_51_13 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
ABC-2 family transporter protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_110_curated_30
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(27052..27909)
DNA (858bp) protein (286aa)
Fluoroquinolones export ATP-binding protein (EC:3.6.3.-)
ABC-type transport system, ATPase component id=1765588 bin=GWE2_Firmicute_51_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
Displaying items 1-30 of 142 in total

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