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S12_scaffold_324_curated

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_324_curated_1
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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204..962
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I613_CLOCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL76778.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
S12_scaffold_324_curated_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

1058..1441
DNA (384bp) protein (128aa)
Putative uncharacterized protein id=1908008 bin=GWE2_Firmicute_51_13 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_324_curated_3
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

Not on your lists

1556..2392
DNA (837bp) protein (279aa)
Integral membrane protein n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MRM0_9FIRM
Integral membrane protein {ECO:0000313|EMBL:CCY94395.1}; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
integral membrane protein
S12_scaffold_324_curated_4
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

2443..3072
DNA (630bp) protein (210aa)
Glycerol-3-phosphate acyltransferase id=2040618 bin=GWE2_Firmicute_51_13 species=Peptoniphilus sp. oral taxon 386 genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_324_curated_5
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3080..3865)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KC55_9FIRM
Methyltransferase domain {ECO:0000313|EMBL:EXG88049.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
methyltransferase type 11
S12_scaffold_324_curated_6
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3960..4373
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I4S2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA79987.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
hypothetical protein
S12_scaffold_324_curated_7
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(4390..5205)
DNA (816bp) protein (272aa)
Nucleotidyltransferase family protein id=1855856 bin=GWE2_Firmicute_51_13 species=Clostridium hathewayi genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_324_curated_8
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5215..5880)
DNA (666bp) protein (222aa)
Sulfite oxidase-like oxidoreductase id=2040622 bin=GWE2_Firmicute_51_13 species=Methanobacterium sp. SWAN-1 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
oxidoreductase molybdopterin binding
Tax=BJP_IG2103_Clostridiales_50_15
S12_scaffold_324_curated_9
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(5955..6404)
DNA (450bp) protein (150aa)
ndk; nucleoside diphosphate kinase Ndk (EC:2.7.4.6)
Nucleoside diphosphate kinase id=4512452 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Tax=BJP_IG2102_Acholeplasmatales_34_18
S12_scaffold_324_curated_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(6406..7332)
DNA (927bp) protein (309aa)
arcC; carbamate kinase (EC:2.7.2.2) rbh
Carbamate kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ65_9FIRM rbh
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
S12_scaffold_324_curated_11
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(7541..8764)
DNA (1224bp) protein (408aa)
Amidohydrolase family protein n=1 Tax=Enterococcus faecium 13.SD.W.09 RepID=T2NM56_ENTFC rbh
Cytosine deaminase {ECO:0000313|EMBL:CEG27020.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
N-acyl-D-amino-acid deacylase rbh
S12_scaffold_324_curated_12
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8783..10138)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Streptococcus minor RepID=UPI00037CC265 rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG27019.1}; Flags: Precursor;; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
citrate transporter rbh
S12_scaffold_324_curated_13
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(10386..11231)
DNA (846bp) protein (282aa)
Putative uncharacterized protein id=1846669 bin=GWE2_Firmicute_51_13 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_324_curated_14
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

11426..12556
DNA (1131bp) protein (377aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIJ1_9CLOT
diguanylate cyclase
Tax=BJP_IG2102_Acholeplasmatales_34_18
S12_scaffold_324_curated_15
Halanaerobium hydrogeniformans, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12585..13010)
DNA (426bp) protein (142aa)
Ferritin, Dps family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTS6_ALKMQ
ferritin Dps family protein
Ferritin Dps family protein {ECO:0000313|EMBL:ADQ15723.1}; TaxID=656519 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium hydrogeniformans (Halanaerobium sp. (strain; sapolanicus)).;"
S12_scaffold_324_curated_16
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13077..13637)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TK81_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM06897.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
S12_scaffold_324_curated_17
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

14051..15625
DNA (1575bp) protein (525aa)
asparagine synthase (EC:6.3.5.4) rbh
Asparagine synthetase id=1805589 bin=GWE2_Firmicute_51_13 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_324_curated_18
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15627..16130
DNA (504bp) protein (168aa)
Uncharacterized protein n=5 Tax=Enterobacteriaceae RepID=C9Y5V4_CROTZ
N-acetyltransferase
N-acetyltransferase {ECO:0000313|EMBL:BAP30880.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
S12_scaffold_324_curated_19
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

16420..17697
DNA (1278bp) protein (426aa)
Diaminopimelate decarboxylase n=1 Tax=Haloplasma contractile SSD-17B RepID=U2EBN4_9BACT rbh
diaminopimelate decarboxylase
Tax=BJP_IG2102_Acholeplasmatales_34_18
S12_scaffold_324_curated_20
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

17699..18904
DNA (1206bp) protein (402aa)
Aspartokinase n=1 Tax=Clostridium carboxidivorans P7 RepID=D6MHI9_9CLOT rbh
putative aspartate kinase, monofunctional class
Tax=BJP_IG2102_Acholeplasmatales_34_18
S12_scaffold_324_curated_21
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

18901..19683
DNA (783bp) protein (261aa)
dapF; diaminopimelate epimerase DapF (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2SS46_9FUSO
Tax=BJP_IG2102_Acholeplasmatales_34_18
S12_scaffold_324_curated_22
Cetobacterium somerae, Cetobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

19680..20654
DNA (975bp) protein (325aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1319815 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Cetobacterium.;" source="Cetobacterium somerae ATCC BAA-474.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Cetobacterium somerae ATCC BAA-474 RepID=U7V466_9FUSO rbh
aspartate-semialdehyde dehydrogenase
S12_scaffold_324_curated_23
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

20651..21541
DNA (891bp) protein (297aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
dihydrodipicolinate synthase (EC:4.2.1.52) rbh
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Haloplasma contractile SSD-17B RepID=U2FMV4_9BACT rbh
S12_scaffold_324_curated_24
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21538..22272
DNA (735bp) protein (245aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PZ64_9CLOT
Dihydrodipicolinate reductase
S12_scaffold_324_curated_25
Exiguobacterium sp. RIT341, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22289..22996
DNA (708bp) protein (236aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023632};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691}; TaxID=1470592 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. RIT341.;"
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase n=1 Tax=Exiguobacterium sp. MH3 RepID=U6BAB7_9BACL rbh
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
S12_scaffold_324_curated_26
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

22999..24126
DNA (1128bp) protein (376aa)
Amidohydrolase id=2262374 bin=GWA2_Tenericute_38_26 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome rbh
amhX; Amidohydrolase AmhX
Tax=BJP_IG2102_Acholeplasmatales_34_18
S12_scaffold_324_curated_27
Paraglaciecola mesophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24208..25314
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Rheinheimera perlucida RepID=UPI00036A8628
Uncharacterized protein {ECO:0000313|EMBL:GAC26437.1}; TaxID=1128912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola mesophila KMM 241.;"
diguanylate cyclase
S12_scaffold_324_curated_28
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

25407..25811
DNA (405bp) protein (135aa)
Putative uncharacterized protein id=4051997 bin=GWF2_Firmicute_51_9 species=Mesotoga sp. PhosAc3 genus=Mesotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Firmicute_51_9 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_324_curated_29
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

25952..27151
DNA (1200bp) protein (400aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein id=2005902 bin=GWE2_Firmicute_51_13 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
transposase IS204/IS1001/IS1096/IS1165 family protein
Tax=GWF2_Firmicutes_51_9_curated
S12_scaffold_324_curated_30
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(27235..28938)
DNA (1704bp) protein (568aa)
Phosphoenolpyruvate-protein phosphotransferase id=4639002 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
phosphoenolpyruvate-protein phosphotransferase rbh
Tax=GWF2_Firmicutes_51_9_curated
Displaying items 1-30 of 64 in total

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