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S12_scaffold_40_curated

Search features with annotation key words

Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_40_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..404
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN09_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57876.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S12_scaffold_40_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

649..1569
DNA (921bp) protein (307aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNS8_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK57623.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LysR family transcriptional regulator rbh
S12_scaffold_40_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1699..2364
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030938F6 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57622.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S12_scaffold_40_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2361..3488
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNS6_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57621.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
high-affinity nickel-transporter rbh
S12_scaffold_40_curated_5
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3674..4651)
DNA (978bp) protein (326aa)
UPI0003CF0972 related cluster n=1 Tax=unknown RepID=UPI0003CF0972 rbh
NAD-dependent epimerase {ECO:0000313|EMBL:ESW90034.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein rbh
S12_scaffold_40_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4653..4856)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNS4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57619.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S12_scaffold_40_curated_7
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4856..5614)
DNA (759bp) protein (253aa)
Dehydrogenase with different specificity {ECO:0000313|EMBL:EDQ34506.1}; EC=1.1.1.30 {ECO:0000313|EMBL:EDQ34506.1};; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D1V6_9RHIZ rbh
short-chain dehydrogenase/reductase SDR rbh
S12_scaffold_40_curated_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5640..6587)
DNA (948bp) protein (316aa)
Cation diffusion facilitator family transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNS3_9RHIZ rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EHK57618.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cation diffusion facilitator family transporter rbh
S12_scaffold_40_curated_9
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6696..7379)
DNA (684bp) protein (228aa)
UPI0003CF7202 related cluster n=1 Tax=unknown RepID=UPI0003CF7202 rbh
Acetyltransferase GCN5 {ECO:0000313|EMBL:ESY96299.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein rbh
S12_scaffold_40_curated_10
unknown

Not on your lists

7477..7743
DNA (267bp) protein (89aa)

This feature has no annotations

S12_scaffold_40_curated_11
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8160..9344
DNA (1185bp) protein (395aa)
Class I and II aminotransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2B4_9RHIZ rbh
Class I and II aminotransferase {ECO:0000313|EMBL:EHH14097.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
class I and II aminotransferase rbh
S12_scaffold_40_curated_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9341..9652
DNA (312bp) protein (104aa)
Membrane protein required for colicin V production n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HN02_9BRAD
Membrane protein required for colicin V production {ECO:0000313|EMBL:ERF86178.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
S12_scaffold_40_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9668..10552)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJR0_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58973.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
marR; MarR family transcriptional regulator
S12_scaffold_40_curated_14
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10651..12495)
DNA (1845bp) protein (615aa)
Potassium transporter TrkA n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SE99_9RHIZ rbh
TrkA-C domain protein {ECO:0000313|EMBL:KFB09148.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
potassium transporter TrkA
S12_scaffold_40_curated_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12599..13351)
DNA (753bp) protein (251aa)
Oxidoreductase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98H81_RHILO rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX11359.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
oxidoreductase rbh
S12_scaffold_40_curated_16
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13581..14429)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KHJ8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPC01612.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
S12_scaffold_40_curated_17
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14450..14884)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LA68_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC01611.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
S12_scaffold_40_curated_18
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15024..15677
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L1S2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC01609.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
TetR family transcriptional regulator
S12_scaffold_40_curated_19
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15741..16448)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BYI6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM74638.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein rbh
S12_scaffold_40_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16506..17498)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00038291D2 rbh
UPF0176 protein MAXJ12_08931 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Rhodanese domain-containing protein rbh
S12_scaffold_40_curated_21
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17660..18589
DNA (930bp) protein (310aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7N8_9RHIZ rbh
Peptidoglycan-binding protein {ECO:0000313|EMBL:EZQ16420.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
peptidoglycan binding domain-containing protein
S12_scaffold_40_curated_22
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18655..19296
DNA (642bp) protein (214aa)
2-keto-3-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:KFB09141.1}; EC=4.1.2.14 {ECO:0000313|EMBL:KFB09141.1};; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase (EC:4.1.2.14)
UPI0003D0086B related cluster n=1 Tax=unknown RepID=UPI0003D0086B
S12_scaffold_40_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19331..21202)
DNA (1872bp) protein (624aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNQ3_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57706.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S12_scaffold_40_curated_24
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21333..22892)
DNA (1560bp) protein (520aa)
Response regulatory protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98H73_RHILO rbh
response regulatory protein rbh
Response regulatory protein {ECO:0000313|EMBL:BAB49993.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S12_scaffold_40_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22991..24838
DNA (1848bp) protein (616aa)
Oligoendopeptidase F n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNQ1_9RHIZ rbh
Oligoendopeptidase F {ECO:0000313|EMBL:EHK57704.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
oligoendopeptidase rbh
S12_scaffold_40_curated_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24952..25848
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNP7_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57700.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S12_scaffold_40_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25917..27362
DNA (1446bp) protein (482aa)
Homospermidine synthase (EC:2.5.1.44) rbh
Homospermidine synthase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNP6_9RHIZ rbh
Homospermidine synthase {ECO:0000313|EMBL:EHK57699.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S12_scaffold_40_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27452..27835
DNA (384bp) protein (128aa)
Outer membrane lipoprotein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNP4_9RHIZ
Outer membrane lipoprotein {ECO:0000313|EMBL:EHK57697.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S12_scaffold_40_curated_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27888..28565
DNA (678bp) protein (226aa)
Peptidase membrane zinc metallopeptidase putative n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HNP3_9RHIZ rbh
Peptidase membrane zinc metallopeptidase putative {ECO:0000313|EMBL:EHK57696.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
peptidase membrane zinc metallopeptidase putative
S12_scaffold_40_curated_30
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28615..29868
DNA (1254bp) protein (418aa)
Phenylacetate-CoA ligase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M843_9RHIZ rbh
Phenylacetate-CoA ligase {ECO:0000313|EMBL:EKF17110.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Phenylacetate-CoA ligase rbh
Displaying items 1-30 of 198 in total

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