ggKbase home page

S12_scaffold_146_curated

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_146_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..506)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPI0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57352.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S12_scaffold_146_curated_2
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1276..3090
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XNK4_FLAIG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG52121.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
S12_scaffold_146_curated_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3411..4466
DNA (1056bp) protein (352aa)
Diguanylate cyclase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJQ7_RHOPT rbh
diguanylate cyclase rbh
Diguanylate cyclase {ECO:0000313|EMBL:ACF03013.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
S12_scaffold_146_curated_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4520..5893)
DNA (1374bp) protein (458aa)
Glutamate--cysteine ligase B, chloroplastic {ECO:0000313|EMBL:CCV08511.1}; EC=6.3.2.2 {ECO:0000313|EMBL:CCV08511.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Glutamate--cysteine ligase B, chloroplastic n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F9B7_9RHIZ rbh
glutamate--cysteine ligase, plant type rbh
S12_scaffold_146_curated_5
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6093..6830)
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BUB5_9RHIZ rbh
16S ribosomal RNA methyltransferase RsmE rbh
S12_scaffold_146_curated_6
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6854..7510)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6D2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV11846.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
S12_scaffold_146_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7585..8289
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX4_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54450.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glutamine amidotransferase rbh
S12_scaffold_146_curated_8
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8561..8701
DNA (141bp) protein (47aa)
Uncharacterized protein n=7 Tax=Mesorhizobium RepID=V7EYE8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY37451.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
S12_scaffold_146_curated_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8674..9444)
DNA (771bp) protein (257aa)
Metallophosphoesterase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LF1_MESSB
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABG61774.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S12_scaffold_146_curated_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9446..10120)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX7_9RHIZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54453.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S12_scaffold_146_curated_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10117..11553)
DNA (1437bp) protein (479aa)
Iron-sulfur cluster binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX8_9RHIZ rbh
Iron-sulfur cluster binding protein {ECO:0000313|EMBL:EHK54454.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
iron-sulfur cluster binding protein rbh
S12_scaffold_146_curated_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11553..12326)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXX9_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54455.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
S12_scaffold_146_curated_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12323..13141)
DNA (819bp) protein (273aa)
GntR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXY0_9RHIZ rbh
Pyruvate dehydrogenase complex repressor {ECO:0000313|EMBL:CDX23579.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transcriptional regulator rbh
S12_scaffold_146_curated_14
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13306..14625
DNA (1320bp) protein (440aa)
UPI0003CFBF9B related cluster n=1 Tax=unknown RepID=UPI0003CFBF9B rbh
Uncharacterized protein {ECO:0000313|EMBL:EXL03716.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein rbh
S12_scaffold_146_curated_15
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14739..16235
DNA (1497bp) protein (499aa)
D-lactate dehydrogenase (EC:1.1.2.4) rbh
UPI0003D03A10 related cluster n=1 Tax=unknown RepID=UPI0003D03A10 rbh
FAD-binding protein {ECO:0000313|EMBL:ESZ18302.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
S12_scaffold_146_curated_16

Not on your lists

16290..16868
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UKS7_METS4
Uncharacterized protein {ECO:0000313|EMBL:KKN92990.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S12_scaffold_146_curated_17
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16948..17199
DNA (252bp) protein (84aa)
transcriptional regulator n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624DB8
Transcriptional regulator AbrB {ECO:0000313|EMBL:KFB10992.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
Regulators of stationary/sporulation gene expression
S12_scaffold_146_curated_18
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17196..17603
DNA (408bp) protein (136aa)
Putative nucleic-acid-binding protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WP70_9GAMM
DNA-binding protein {ECO:0000313|EMBL:KFB10993.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
S12_scaffold_146_curated_19
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17600..18805
DNA (1206bp) protein (402aa)
FAD linked oxidase domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TNB0_MESCW rbh
FAD linked oxidase rbh
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADV11668.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
S12_scaffold_146_curated_20
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18870..19244
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BUC6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM73178.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
S12_scaffold_146_curated_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19315..19539
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L8X2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96881.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
S12_scaffold_146_curated_22
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19536..19868
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CKM4_METED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK85327.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
S12_scaffold_146_curated_23
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19879..21207
DNA (1329bp) protein (443aa)
2-hydroxy-acid oxidase n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GN37_9RHIZ rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
hypothetical protein rbh
S12_scaffold_146_curated_24
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21211..22071)
DNA (861bp) protein (287aa)
Bile acid:sodium symporter n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CW89_9RHOB rbh
Bile acid:sodium symporter {ECO:0000313|EMBL:KIC50811.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
P3 protein (Solute carrier family 10 member 3)
S12_scaffold_146_curated_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22304..23080)
DNA (777bp) protein (259aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXY7_9RHIZ rbh
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EHK54410.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ErfK/YbiS/YcfS/YnhG family protein rbh
S12_scaffold_146_curated_26
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23291..23929
DNA (639bp) protein (213aa)
3-methyladenine DNA glycosylase n=1 Tax=Rhizobium loti RepID=UPI00037B0FF7 rbh
Methyladenine glycosylase family protein {ECO:0000313|EMBL:AID28325.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
DNA-3-methyladenine glycosylase I rbh
S12_scaffold_146_curated_27
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23926..24336
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0B1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGF68578.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
S12_scaffold_146_curated_28
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24356..24769)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367CFE8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA71508.1}; Flags: Precursor;; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
S12_scaffold_146_curated_29
unknown

Not on your lists

comp(24783..25016)
DNA (234bp) protein (78aa)

This feature has no annotations

S12_scaffold_146_curated_30
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25206..26828
DNA (1623bp) protein (541aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
UPI0003CF0344 related cluster n=1 Tax=unknown RepID=UPI0003CF0344 rbh
histidyl-tRNA synthetase rbh
Displaying items 1-30 of 106 in total

View Taxonomy