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S12_scaffold_2141_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_2141_curated_1
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..94)
DNA (93bp) protein (31aa)
transposase IS116 n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B2FC61
Transposase {ECO:0000313|EMBL:AJR26670.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
transposase IS116/IS110/IS902 family protein
S12_scaffold_2141_curated_2
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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384..641
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000367BB39
hypothetical protein
Tax=GWF1_Sphingomonadales_63_6_curated
S12_scaffold_2141_curated_3
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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645..1955
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036CEC3C rbh
cell filamentation protein Fic
Tax=GWF1_Sphingomonadales_63_6_curated
S12_scaffold_2141_curated_4
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2020..2463)
DNA (444bp) protein (148aa)
MerR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B7B297
MerR family transcriptional regulator
Tax=GWF1_Sphingomonadales_63_6_curated
S12_scaffold_2141_curated_5
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2534..2812
DNA (279bp) protein (93aa)
Transposase IS3/IS911 family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGX1_SPHWW
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABQ71530.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
S12_scaffold_2141_curated_6
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2854..3705
DNA (852bp) protein (284aa)
Integrase, catalytic region n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VGX0_SPHWW rbh
Integrase {ECO:0000313|EMBL:KKC28018.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
integrase catalytic subunit rbh
S12_scaffold_2141_curated_7
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3702..4910)
DNA (1209bp) protein (403aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MRP0_9SPHN rbh
Transposase {ECO:0000313|EMBL:EXS68093.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
transposase of ISMdi7, IS21 family (ORF 1) rbh
S12_scaffold_2141_curated_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5051..6286
DNA (1236bp) protein (412aa)
TonB-dependent receptor n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5C34D
Uncharacterized protein {ECO:0000313|EMBL:GAO53620.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
S12_scaffold_2141_curated_9
unknown

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comp(6149..6727)
DNA (579bp) protein (193aa)

This feature has no annotations

S12_scaffold_2141_curated_10
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6721..7422)
DNA (702bp) protein (234aa)
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CY33_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE52296.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
Displaying 10 items

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