name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
S12_scaffold_104_curated_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(101..1582)
|
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
rbh
Exodeoxyribonuclease 7 large subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC03_NOVAD
rbh
|
|
S12_scaffold_104_curated_2
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1653..2867
|
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
rbh
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC02_NOVAD
rbh
|
|
S12_scaffold_104_curated_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2907..4109)
|
Succinyl-CoA:(R)-citramalate CoA-transferase {ECO:0000313|EMBL:KHS47759.1}; EC=2.8.3.- {ECO:0000313|EMBL:KHS47759.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
succinyl-CoA:(R)-citramalate CoA-transferase (EC:2.8.3.-)
rbh
Succinyl-CoA:(R)-citramalate CoA-transferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GC00_NOVAD
rbh
|
|
S12_scaffold_104_curated_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4106..5992)
|
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABD24624.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ABD24624.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
5-oxoprolinase (EC:3.5.2.9)
rbh
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBZ9_NOVAD
rbh
|
|
S12_scaffold_104_curated_5
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6006..8054)
|
5-oxoprolinase {ECO:0000313|EMBL:KHS47757.1}; EC=3.5.2.9 {ECO:0000313|EMBL:KHS47757.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
5-oxoprolinase (EC:3.5.2.9)
rbh
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBZ8_NOVAD
rbh
|
|
S12_scaffold_104_curated_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8062..8970)
|
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:KHS47756.1}; EC=4.1.3.4 {ECO:0000313|EMBL:KHS47756.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4)
rbh
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBZ7_NOVAD
rbh
|
|
S12_scaffold_104_curated_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9269..11785
|
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBZ6_NOVAD
rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABD24627.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
TonB-dependent receptor
rbh
|
|
S12_scaffold_104_curated_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11844..12491
|
Transcriptional regulator, GntR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBZ5_NOVAD
rbh
GntR family transcriptional regulator
rbh
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABD24628.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_104_curated_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12495..12872)
|
Ferredoxin-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBZ1_NOVAD
ferredoxin-like
Ferredoxin-like protein {ECO:0000313|EMBL:ABD24632.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_104_curated_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12869..15022)
|
Peptidase S9, prolyl oligopeptidase active site region n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBZ0_NOVAD
rbh
Peptidase S9, prolyl oligopeptidase active site region {ECO:0000313|EMBL:ABD24633.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
peptidase S9, prolyl oligopeptidase active site region
rbh
|
|
S12_scaffold_104_curated_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15097..15522)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY9_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD24634.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_104_curated_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15576..17036)
|
Type I secretion outer membrane protein, TolC n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY8_NOVAD
rbh
Type I secretion outer membrane protein, TolC
rbh
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:ABD24635.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_104_curated_13
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17042..17647)
|
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY7_NOVAD
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:ABD24636.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_104_curated_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17842..19362
|
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:GAO54461.1}; EC=4.2.1.2 {ECO:0000313|EMBL:GAO54461.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
fumarase (EC:4.2.1.2)
rbh
Fumarase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY6_NOVAD
rbh
|
|
S12_scaffold_104_curated_15
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19457..20881
|
Sensor histidine kinase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z622_9SPHN
rbh
Sensor histidine kinase {ECO:0000313|EMBL:EGD59804.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
histidine kinase
rbh
|
|
S12_scaffold_104_curated_16
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20892..21629
|
Transcriptional regulator, LytR/AlgR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY4_NOVAD
rbh
LytR/AlgR family transcriptional regulator
rbh
Transcriptional regulator, LytR/AlgR family {ECO:0000313|EMBL:ABD24639.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_104_curated_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21651..23468)
|
AMP-dependent synthetase and ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY3_NOVAD
rbh
AMP-dependent synthetase/ligase {ECO:0000313|EMBL:KHS47742.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
AMP-dependent synthetase/ligase
rbh
|
|
S12_scaffold_104_curated_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23596..25374)
|
gamma-glutamyltranspeptidase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9DA
rbh
Ggt protein {ECO:0000313|EMBL:GAN13302.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
gamma-glutamyltranspeptidase
|
|
S12_scaffold_104_curated_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25385..26440)
|
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
rbh
Dihydroorotate dehydrogenase (quinone) {ECO:0000255|HAMAP-Rule:MF_00225}; EC=1.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000255|HAMAP-Rule:MF_00225}; Short=DHOD {ECO:0000255|HAMAP-Rule:MF_00225};; Short=DHODase {ECO:0000255|HAMAP-Rule:MF_00225};; Dihydroorotate oxidase {ECO:0000255|HAMAP-Rule:MF_00225}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=PYRD_NOVAD
rbh
|
|
S12_scaffold_104_curated_20
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26886..27308
|
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY0_NOVAD
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KHS47739.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
BadM/Rrf2 family transcriptional regulator
|
|
S12_scaffold_104_curated_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27305..28786
|
Iron-regulated ABC transporter membrane component SufB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBX9_NOVAD
rbh
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:KHS47738.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
cysteine desulfurase activator complex subunit SufB
rbh
|
|
S12_scaffold_104_curated_22
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28872..29354
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBX8_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54417.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
S12_scaffold_104_curated_23
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29351..29833
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S161_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFL47976.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
hypothetical protein
|
|
S12_scaffold_104_curated_24
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29836..30579
|
FeS assembly ATPase SufC n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WFM7_9SPHN
rbh
FeS assembly ATPase SufC {ECO:0000313|EMBL:KHS47736.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
FeS assembly ATPase SufC
rbh
|
|
S12_scaffold_104_curated_25
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30576..31313
|
SufBD n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBX6_NOVAD
rbh
SufBD
rbh
SufBD {ECO:0000313|EMBL:ABD24647.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_104_curated_26
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31310..32521
|
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Cysteine desulfurase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBX5_NOVAD
rbh
SufS subfamily cysteine desulfurase
rbh
|
|
S12_scaffold_104_curated_27
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32518..33009
|
FeS assembly SUF system protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5CE96
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD24649.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
S12_scaffold_104_curated_28
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33132..33494
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B554C3
HesB/YadR/YfhF {ECO:0000313|EMBL:KHS47732.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
HesB/YadR/YfhF
|
|
S12_scaffold_104_curated_29
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33491..34435)
|
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P9G1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS47731.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
|
|
S12_scaffold_104_curated_30
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34530..36524)
|
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule:MF_00184};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Threonine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=SYT_NOVAD
rbh
|