ggKbase home page

S12_scaffold_1464_curated

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_1464_curated_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..867)
DNA (867bp) protein (289aa)
Type II secretion system protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM8_PARL1 rbh
type II secretion system protein rbh
Type II secretion system protein {ECO:0000313|EMBL:ABS61861.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(875..1855)
DNA (981bp) protein (327aa)
Type II secretion system protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM7_PARL1 rbh
type II secretion system protein rbh
Type II secretion system protein {ECO:0000313|EMBL:ABS61860.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1869..3218)
DNA (1350bp) protein (450aa)
Type II secretion system protein E n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM6_PARL1 rbh
type II secretion system protein E rbh
Type II secretion system protein E {ECO:0000313|EMBL:ABS61859.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3356..4627)
DNA (1272bp) protein (424aa)
Response regulator receiver protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM5_PARL1 rbh
response regulator receiver protein rbh
Response regulator receiver protein {ECO:0000313|EMBL:ABS61858.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4624..5331)
DNA (708bp) protein (236aa)
Pilus (Caulobacter type) biogenesis lipoprotein CpaD n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM4_PARL1
pilus biogenesis lipoprotein CpaD
Pilus (Caulobacter type) biogenesis lipoprotein CpaD {ECO:0000313|EMBL:ABS61857.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_6
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5331..6770)
DNA (1440bp) protein (480aa)
Type II and III secretion system protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM3_PARL1 rbh
type II and III secretion system protein rbh
Type II and III secretion system protein {ECO:0000313|EMBL:ABS61856.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6775..7575)
DNA (801bp) protein (267aa)
SAF domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM2_PARL1
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ABS61855.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_8
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7600..8115)
DNA (516bp) protein (172aa)
Peptidase A24A prepilin type IV n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM1_PARL1
peptidase A24A prepilin type IV
Peptidase A24A prepilin type IV {ECO:0000313|EMBL:ABS61854.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_9
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8343..8510)
DNA (168bp) protein (56aa)
Flp/Fap pilin component n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RFA7_9RHIZ
Flp/Fap pilin component {ECO:0000313|EMBL:ESR24826.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
Flp/Fap pilin component
S12_scaffold_1464_curated_10
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8820..9563)
DNA (744bp) protein (248aa)
Cyclic nucleotide-binding protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPL9_PARL1
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ABS61852.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9732..10289
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPL8_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS61851.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10400..10942)
DNA (543bp) protein (181aa)
von Willebrand factor type A n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPL7_PARL1
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:ABS61850.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_13
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10935..11696)
DNA (762bp) protein (254aa)
von Willebrand factor type A n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPL7_PARL1
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:ABS61850.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_14
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11777..12535
DNA (759bp) protein (253aa)
TadE family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPL6_PARL1
TadE family protein
TadE family protein {ECO:0000313|EMBL:ABS61849.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_15
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12550..13149
DNA (600bp) protein (200aa)
TadE family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPL5_PARL1
TadE family protein
TadE family protein {ECO:0000313|EMBL:ABS61848.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S12_scaffold_1464_curated_trna_1
unknown

Not on your lists

comp(13421..13507)
DNA (87bp)
transferRNA Ser
S12_scaffold_1464_curated_16
unknown

Not on your lists

13628..13819
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 17 items

View Taxonomy