ggKbase home page

S12_scaffold_2344_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_2344_curated_1
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..697)
DNA (696bp) protein (232aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003143BB2 rbh
ribosomal RNA methyltransferase RrmJ/FtsJ rbh
S12_scaffold_2344_curated_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(697..1821)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030AE123 rbh
Ppx/GppA phosphatase rbh
Ppx/GppA phosphatase {ECO:0000313|EMBL:ACB81778.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
S12_scaffold_2344_curated_3
unknown

Not on your lists

1902..2117
DNA (216bp) protein (72aa)

This feature has no annotations

S12_scaffold_2344_curated_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2237..3115
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F0D9F7
porin
Porin {ECO:0000313|EMBL:ACL61459.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
S12_scaffold_2344_curated_5
unknown

Not on your lists

3413..3544
DNA (132bp) protein (44aa)

This feature has no annotations

S12_scaffold_2344_curated_6
unknown

Not on your lists

comp(3664..4119)
DNA (456bp) protein (152aa)

This feature has no annotations

S12_scaffold_2344_curated_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4376..5239)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1T2_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH91507.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_2344_curated_8
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5700..6398)
DNA (699bp) protein (233aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EBB19A rbh
ABC transporter-like protein rbh
S12_scaffold_2344_curated_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6406..6891)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000307D8DA
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:EIM29669.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
LolC/E family lipoprotein releasing system, transmembrane protein
Displaying 9 items

View Taxonomy