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S12_scaffold_1090_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_1090_curated_1
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..447)
DNA (447bp) protein (149aa)
MT-A70 family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7ILF3_XANP2
adenine-specific DNA methyltransferase
Adenine-specific DNA methyltransferase {ECO:0000313|EMBL:BAQ18335.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
S12_scaffold_1090_curated_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(444..1094)
DNA (651bp) protein (217aa)
Mu-like prophage protein gp16 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I7L1_AZOC5
Mu-like prophage protein gp16
Mu-like prophage protein gp16 {ECO:0000313|EMBL:BAF88132.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_1090_curated_3
unknown

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comp(1091..1441)
DNA (351bp) protein (117aa)

This feature has no annotations

S12_scaffold_1090_curated_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1438..2154)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JP77_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT49087.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
S12_scaffold_1090_curated_5
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2167..2802)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QCJ8_RHOPT
Sulfate transporter {ECO:0000313|EMBL:KJR62469.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
S12_scaffold_1090_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2795..3205)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037F7011
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACF01871.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
S12_scaffold_1090_curated_7
unknown

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3433..3849
DNA (417bp) protein (139aa)

This feature has no annotations

S12_scaffold_1090_curated_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3792..4538)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FYW6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDP54036.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
S12_scaffold_1090_curated_9
unknown

Not on your lists

4823..6040
DNA (1218bp) protein (406aa)

This feature has no annotations

S12_scaffold_1090_curated_10
unknown

Not on your lists

6071..6337
DNA (267bp) protein (89aa)

This feature has no annotations

S12_scaffold_1090_curated_11
Rhizobium phage RR1-B, Caudovirales, Viruses

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comp(6691..7158)
DNA (468bp) protein (156aa)
Conserved transposable prophage protein id=2514850 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
Uncharacterized protein {ECO:0000313|EMBL:AGN38675.1}; TaxID=929834 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage RR1-B.;"
hypothetical protein
S12_scaffold_1090_curated_12
unknown

Not on your lists

comp(7158..7328)
DNA (171bp) protein (57aa)

This feature has no annotations

S12_scaffold_1090_curated_13
unknown

Not on your lists

comp(7328..7504)
DNA (177bp) protein (59aa)

This feature has no annotations

S12_scaffold_1090_curated_14
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7501..7860)
DNA (360bp) protein (120aa)
Putative transcriptional regulator, Nlp n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IP05_XANP2
putative transcriptional regulator Nlp
Putative transcriptional regulator, Nlp {ECO:0000313|EMBL:ABS69751.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_1090_curated_15
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8094..8543
DNA (450bp) protein (150aa)
Putative phage repressor n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0LD08_MAGSM
phage repressor
Putative phage repressor {ECO:0000313|EMBL:ABK45851.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
S12_scaffold_1090_curated_16
unknown

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8563..8757
DNA (195bp) protein (65aa)

This feature has no annotations

S12_scaffold_1090_curated_17
unknown

Not on your lists

8777..9277
DNA (501bp) protein (167aa)

This feature has no annotations

S12_scaffold_1090_curated_trna_2
unknown

Not on your lists

comp(9708..9781)
DNA (74bp)
transferRNA Arg
S12_scaffold_1090_curated_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9802..10107)
DNA (306bp) protein (102aa)
ETC complex I subunit conserved region n=1 Tax=Microvirga sp. WSM3557 RepID=I4YY30_9RHIZ
ETC complex I subunit conserved region {ECO:0000313|EMBL:EIM28872.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
NADH dehydrogenase (ubiquinone) Fe-S protein 4
S12_scaffold_1090_curated_trna_1
unknown

Not on your lists

comp(10171..10244)
DNA (74bp)
transferRNA Pro
S12_scaffold_1090_curated_19
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10778..12187)
DNA (1410bp) protein (470aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EK31_METSB rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACK49978.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
S12_scaffold_1090_curated_20
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12273..12830
DNA (558bp) protein (186aa)
UPI0003CECE9D related cluster n=1 Tax=unknown RepID=UPI0003CECE9D
Integrase {ECO:0000313|EMBL:ESY29992.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
hypothetical protein
S12_scaffold_1090_curated_21
unknown

Not on your lists

comp(13075..13377)
DNA (303bp) protein (101aa)

This feature has no annotations

S12_scaffold_1090_curated_22
unknown

Not on your lists

comp(13864..14085)
DNA (222bp) protein (74aa)

This feature has no annotations

S12_scaffold_1090_curated_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14205..14957)
DNA (753bp) protein (251aa)
membrane protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B66E21
Uncharacterized protein {ECO:0000313|EMBL:KFC74119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
membrane protein
S12_scaffold_1090_curated_24
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15246..16925)
DNA (1680bp) protein (560aa)
Type I secretion target GGXGXDXXX repeat-containing domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZV45_9PROT
Type I secretion target GGXGXDXXX repeat-containing domain protein {ECO:0000313|EMBL:EHM03212.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
S12_scaffold_1090_curated_25
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17206..17541)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M5A0A8_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM92210.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
S12_scaffold_1090_curated_26
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18228..18599)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRG9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG67289.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
S12_scaffold_1090_curated_27
unknown

Not on your lists

18864..19310
DNA (447bp) protein (149aa)

This feature has no annotations

Displaying 29 items

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