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S12_scaffold_194_curated

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_194_curated_1
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..156)
DNA (156bp) protein (52aa)
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC61503.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
S12_scaffold_194_curated_2
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(256..561)
DNA (306bp) protein (102aa)
Putative small integral membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVB0_9RHIZ
Membrane protein {ECO:0000313|EMBL:KFG69180.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
membrane protein
S12_scaffold_194_curated_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(572..1360)
DNA (789bp) protein (263aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131F5_RHOPS
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABE41284.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
S12_scaffold_194_curated_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1357..2262)
DNA (906bp) protein (302aa)
Permease component of ABC-type sugar transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVB2_9RHIZ
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EIM27904.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ABC transporter permease
S12_scaffold_194_curated_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2259..3335)
DNA (1077bp) protein (359aa)
Putative ATP-binding protein of sugar ABC transporter n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AW94_AZOBR
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIB15031.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
S12_scaffold_194_curated_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3337..4443)
DNA (1107bp) protein (369aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVB4_9RHIZ
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EIM27906.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ABC transporter
S12_scaffold_194_curated_7
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4556..6076)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KVV0_RHOSK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACM04178.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
S12_scaffold_194_curated_8
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6356..8059
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036CB336 rbh
glycerol-3-phosphate dehydrogenase rbh
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:ACM04179.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
S12_scaffold_194_curated_9
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8059..8868
DNA (810bp) protein (270aa)
Transcriptional regulator, GntR family n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K8L9_9RHOB
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACM04180.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain KD131 / KCTC 12085).;"
S12_scaffold_194_curated_10
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8855..9868)
DNA (1014bp) protein (338aa)
glycerone kinase (EC:2.7.1.29)
Transcriptional regulator n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JVJ4_9RHOB rbh
Transcriptional regulator {ECO:0000313|EMBL:EKE74329.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
S12_scaffold_194_curated_11
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10085..11857
DNA (1773bp) protein (591aa)
Acetolactate synthase large subunit n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JVI5_9RHOB rbh
Acetolactate synthase large subunit {ECO:0000313|EMBL:EKE74319.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
acetolactate synthase large subunit rbh
S12_scaffold_194_curated_12
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11931..12710)
DNA (780bp) protein (260aa)
UPI0003CFC954 related cluster n=1 Tax=unknown RepID=UPI0003CFC954 rbh
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAK71929.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
transcriptional regulator
S12_scaffold_194_curated_13
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12882..13964
DNA (1083bp) protein (361aa)
UPI0003D06955 related cluster n=1 Tax=unknown RepID=UPI0003D06955 rbh
Putative sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAK71930.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
putative ABC transporter rbh
S12_scaffold_194_curated_14
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13978..15471
DNA (1494bp) protein (498aa)
UPI0003D01745 related cluster n=1 Tax=unknown RepID=UPI0003D01745 rbh
Putative sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAK71931.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
ABC transporter-like protein rbh
S12_scaffold_194_curated_15
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15464..16423
DNA (960bp) protein (320aa)
UPI0003CFF4D0 related cluster n=1 Tax=unknown RepID=UPI0003CFF4D0 rbh
Putative sugar ABC transporter permease protein {ECO:0000313|EMBL:GAK71932.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
inner-membrane translocator rbh
S12_scaffold_194_curated_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16420..17352
DNA (933bp) protein (311aa)
UPI0003D05F3D related cluster n=1 Tax=unknown RepID=UPI0003D05F3D rbh
ABC transporter permease {ECO:0000313|EMBL:ESZ30084.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
inner-membrane translocator rbh
S12_scaffold_194_curated_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17357..18073
DNA (717bp) protein (239aa)
UPI0003CF9F5E related cluster n=1 Tax=unknown RepID=UPI0003CF9F5E rbh
Cyclase {ECO:0000313|EMBL:ESZ30083.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
Cyclase family protein
S12_scaffold_194_curated_18
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18100..19296
DNA (1197bp) protein (399aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
Mannonate dehydratase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJF7_AGRRK rbh
uxuA; mannonate dehydratase rbh
S12_scaffold_194_curated_19
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19301..20704
DNA (1404bp) protein (468aa)
Mannitol-1-phosphate/altronate dehydrogenase n=1 Tax=Rhizobium sp. CF080 RepID=J2JCT9_9RHIZ rbh
D-mannonate oxidoreductase {ECO:0000313|EMBL:KGD86359.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
yeiQ; Uncharacterized oxidoreductase YeiQ
S12_scaffold_194_curated_20
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20738..21757
DNA (1020bp) protein (340aa)
Zinc-type alcohol dehydrogenase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJF9_AGRRK rbh
Starvation-sensing protein RspB {ECO:0000313|EMBL:GAK71936.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
zinc-type alcohol dehydrogenase rbh
S12_scaffold_194_curated_21
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21781..22566)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6T6_STAND rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH88310.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_194_curated_22
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22566..24251)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6T5_STAND rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH88309.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_194_curated_23
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24306..25247)
DNA (942bp) protein (314aa)
Beta-lactamase domain-containing protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6T4_STAND rbh
beta-lactamase domain-containing protein rbh
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:ADH88308.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_194_curated_24
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25301..25996
DNA (696bp) protein (232aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6T3_STAND rbh
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen rbh
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADH88307.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_194_curated_25
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26001..26432
DNA (432bp) protein (144aa)
Transcriptional regulator, ArsR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6T2_STAND
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADH88306.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_194_curated_26
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26516..27853)
DNA (1338bp) protein (446aa)
Cytochrome c n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I1K9_AZOC5 rbh
cytochrome c rbh
Cytochrome c {ECO:0000313|EMBL:BAF87390.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_194_curated_27
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27856..30042)
DNA (2187bp) protein (729aa)
Putative aldehyde oxidase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I1L1_AZOC5 rbh
aldehyde oxidase rbh
Putative aldehyde oxidase {ECO:0000313|EMBL:BAF87391.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_194_curated_28
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30026..30478)
DNA (453bp) protein (151aa)
Ferredoxin n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I1L4_AZOC5
ferredoxin
Ferredoxin {ECO:0000313|EMBL:BAF87392.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_194_curated_29
unknown

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comp(30829..31149)
DNA (321bp) protein (107aa)

This feature has no annotations

S12_scaffold_194_curated_30
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31149..32822)
DNA (1674bp) protein (558aa)
Putative RecA-superfamily ATPase implicated in signal transduction n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T093_META2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS07728.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
recombinase A rbh
Displaying items 1-30 of 114 in total

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