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S12_scaffold_731_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_731_curated_1
Gluconacetobacter sp. SXCC-1, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..552
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034B0482
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:EGG77445.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
malonamidase E2
S12_scaffold_731_curated_2
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

549..1073
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034AC0B8
Uncharacterized protein {ECO:0000313|EMBL:KGB81500.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
actinorhodin polyketide dimerase
S12_scaffold_731_curated_3
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1121..2164
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034B1C25 rbh
2,5-dihydroxypyridine 5,6-dioxygenase {ECO:0000313|EMBL:KFI24460.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
Leucyl aminopeptidase (aminopeptidase T)
S12_scaffold_731_curated_4
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2217..2615)
DNA (399bp) protein (133aa)
4-carboxymuconolactone decarboxylase n=1 Tax=Cupriavidus sp. WS RepID=UPI000370E261
Uncharacterized protein {ECO:0000313|EMBL:EJZ58729.1}; TaxID=743713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens R124.;"
pcaC; 4-carboxymuconolactone decarboxylase
S12_scaffold_731_curated_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2612..3313)
DNA (702bp) protein (234aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3C8J8_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:KGE02134.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
GntR family transcriptional regulator
S12_scaffold_731_curated_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3314..4087)
DNA (774bp) protein (258aa)
Alpha/beta hydrolase fold n=1 Tax=Burkholderia sp. H160 RepID=B5WEV8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EWY37201.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
mhpC; Alpha/beta hydrolase fold
S12_scaffold_731_curated_7
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4237..4944
DNA (708bp) protein (236aa)
enoyl-CoA hydratase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035EDFFA
enoyl-CoA hydratase
Enoyl-CoA hydratase {ECO:0000313|EMBL:KDN16137.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
S12_scaffold_731_curated_8
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4969..5877
DNA (909bp) protein (303aa)
Probable 6-phosphogluconate dehydrogenase protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXH4_POLGS
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:KEP75237.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
6-phosphogluconate dehydrogenase
S12_scaffold_731_curated_9
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5938..6771
DNA (834bp) protein (278aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDC3 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE54720.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
short-chain dehydrogenase
S12_scaffold_731_curated_10
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6829..7746)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000360CB37 rbh
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EAS48424.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
unnamed protein product
S12_scaffold_731_curated_11
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7773..8675)
DNA (903bp) protein (301aa)
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JIF7_AGRRK rbh
transcriptional regulator rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KEA07858.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
S12_scaffold_731_curated_12
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8885..10024
DNA (1140bp) protein (380aa)
Altronate oxidoreductase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IHJ3_AZOC5 rbh
altronate oxidoreductase rbh
Altronate oxidoreductase {ECO:0000313|EMBL:BAF89282.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_731_curated_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10030..11553
DNA (1524bp) protein (508aa)
Altronate hydrolase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IHH8_AZOC5 rbh
altronate hydrolase rbh
Altronate hydrolase {ECO:0000313|EMBL:BAF89276.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_731_curated_14
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11564..12661)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HV29_AZOC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAF87002.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_731_curated_15
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12782..13738)
DNA (957bp) protein (319aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI0003772C4D rbh
LysR family transcriptional regulator rbh
Tax=BJP_IG2158_Rhodobacterales_64_37
S12_scaffold_731_curated_16
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13746..17306)
DNA (3561bp) protein (1187aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A004_STAND rbh
multi-sensor hybrid histidine kinase rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ADH87418.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_731_curated_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17468..17896
DNA (429bp) protein (143aa)
Large-conductance mechanosensitive channel n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A005_STAND
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_731_curated_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17994..18554
DNA (561bp) protein (187aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) rbh
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ADH87420.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ADH87420.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A006_STAND rbh
S12_scaffold_731_curated_19
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18554..19645
DNA (1092bp) protein (364aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Xanthobacteraceae RepID=UPI00037B7B72 rbh
dTDP-glucose 4,6-dehydratase rbh
S12_scaffold_731_curated_20
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19642..20538
DNA (897bp) protein (299aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133) rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ADH87422.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ADH87422.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A008_STAND rbh
S12_scaffold_731_curated_21
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20535..21407
DNA (873bp) protein (291aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A009_STAND rbh
glucose-1-phosphate thymidylyltransferase rbh
S12_scaffold_731_curated_22
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21491..22465
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A598_STAND rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH89986.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_731_curated_23
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22493..22990
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A596_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89984.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_731_curated_24
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23072..24448
DNA (1377bp) protein (459aa)
ABC-1 domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A595_STAND rbh
ABC transporter rbh
ABC-1 domain protein {ECO:0000313|EMBL:ADH89983.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_731_curated_25
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24532..24825
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A594_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89982.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Displaying 25 items

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