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S12_scaffold_182_curated

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_182_curated_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257..1996
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IP38_AZOC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAF89826.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_182_curated_2
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2018..4009
DNA (1992bp) protein (664aa)
TRAG family protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6H1_STAND rbh
TRAG family protein rbh
TRAG family protein {ECO:0000313|EMBL:ADH90169.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_182_curated_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4015..4446
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A6H2_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH90170.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_182_curated_4
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4509..4919)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZG85_ROSLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI94816.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
S12_scaffold_182_curated_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5045..6562
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034D4A14 rbh
Serine recombinase {ECO:0000313|EMBL:EXL08881.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
recombinase/resolvase rbh
S12_scaffold_182_curated_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6559..7452
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034CDC54 rbh
Plasmid partitioning protein {ECO:0000313|EMBL:CEG09624.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
parB; partitioning protein rbh
S12_scaffold_182_curated_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7449..8351
DNA (903bp) protein (301aa)
Putative RepB partitioning protein / ParB-like protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZG82_ROSLO rbh
Plasmid stablization protein ParB {ECO:0000313|EMBL:EXL08883.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
RepB partitioning protein / ParB-like protein rbh
S12_scaffold_182_curated_8
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8745..9770
DNA (1026bp) protein (342aa)
transposase IS110 n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000347C1E3 rbh
Transposase {ECO:0000313|EMBL:GAN46952.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
transposase IS116/IS110/IS902 family protein rbh
S12_scaffold_182_curated_9
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10175..10807)
DNA (633bp) protein (211aa)
UPI0003CFE27A related cluster n=1 Tax=unknown RepID=UPI0003CFE27A
Uncharacterized protein {ECO:0000313|EMBL:ESZ23408.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
S12_scaffold_182_curated_10
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10834..11568)
DNA (735bp) protein (245aa)
UPI0003CF0042 related cluster n=1 Tax=unknown RepID=UPI0003CF0042 rbh
Membrane protein {ECO:0000313|EMBL:ESZ41609.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
membrane protein
S12_scaffold_182_curated_11
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11618..12079)
DNA (462bp) protein (154aa)
UPI0003CED85D related cluster n=1 Tax=unknown RepID=UPI0003CED85D
Uncharacterized protein {ECO:0000313|EMBL:EXL02820.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
S12_scaffold_182_curated_12
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12132..12413
DNA (282bp) protein (94aa)
nickel-resistant pritein NirB n=1 Tax=Xanthobacteraceae RepID=UPI00035DBE1C
Nickel-resistant pritein NirB {ECO:0000313|EMBL:ESZ11273.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
S12_scaffold_182_curated_13
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12421..12726
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003749537
Uncharacterized protein {ECO:0000313|EMBL:EAU55157.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
high-affinity nickel-transporter
S12_scaffold_182_curated_14
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12730..14049
DNA (1320bp) protein (440aa)
major facilitator transporter n=1 Tax=Xanthobacteraceae RepID=UPI00036906FB rbh
putative H+ Antiporter protein rbh
Putative H+ Antiporter protein {ECO:0000313|EMBL:CCF00559.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
S12_scaffold_182_curated_15
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14075..14512
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037300FA
Membrane protein {ECO:0000313|EMBL:ESW75459.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
S12_scaffold_182_curated_16
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14515..15240
DNA (726bp) protein (242aa)
UPI0003CE6F4D related cluster n=1 Tax=unknown RepID=UPI0003CE6F4D rbh
ABC transporter permease {ECO:0000313|EMBL:ESW75466.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
high-affinity nickel-transporter
S12_scaffold_182_curated_17
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15367..16185
DNA (819bp) protein (273aa)
sulfurtransferase n=1 Tax=Rhizobium loti RepID=UPI0003796203 rbh
Chromate resistance exported family protein {ECO:0000313|EMBL:AID34218.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
S12_scaffold_182_curated_18
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16197..17597
DNA (1401bp) protein (467aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EP41_METSB rbh
Chromate transporter {ECO:0000313|EMBL:ETR76126.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
chromate transporter rbh
S12_scaffold_182_curated_19
unknown

Not on your lists

17640..17840
DNA (201bp) protein (67aa)

This feature has no annotations

S12_scaffold_182_curated_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17901..18419
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9ABW4_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE98543.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
S12_scaffold_182_curated_21
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18416..21490
DNA (3075bp) protein (1025aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9ABW3_RHIFH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE98542.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
S12_scaffold_182_curated_22
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21471..22154
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9ABW2_RHIFH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE98541.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
S12_scaffold_182_curated_23
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22272..22502)
DNA (231bp) protein (77aa)
UPI0003CE5708 related cluster n=1 Tax=unknown RepID=UPI0003CE5708
Uncharacterized protein {ECO:0000313|EMBL:ESY73854.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
S12_scaffold_182_curated_24
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22499..23692)
DNA (1194bp) protein (398aa)
transposase n=1 Tax=Rhizobium loti RepID=UPI00037A7E37 rbh
Transposase {ECO:0000313|EMBL:ESY60775.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
transposase rbh
S12_scaffold_182_curated_25
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23696..24604)
DNA (909bp) protein (303aa)
integrase n=1 Tax=Rhizobium loti RepID=UPI000367353B rbh
Integrase {ECO:0000313|EMBL:ESY60776.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
putative transposase number 1 for insertion sequence NGRIS-16f
S12_scaffold_182_curated_26
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24867..25982)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IPB9_AZOC5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAF89854.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_182_curated_27
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26371..27297
DNA (927bp) protein (309aa)
Conjugal transfer protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IPC5_AZOC5 rbh
trbB; conjugal transfer protein rbh
Conjugal transfer protein {ECO:0000313|EMBL:BAF89856.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_182_curated_28
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27294..27626
DNA (333bp) protein (111aa)
Conjugal transfer protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IPC8_AZOC5
trbC; conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:BAF89857.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_182_curated_29
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27626..27895
DNA (270bp) protein (90aa)
conjugal transfer protein n=1 Tax=Xanthobacteraceae RepID=UPI000382A9C4
trbD; conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:BAF89858.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_182_curated_30
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27909..30362
DNA (2454bp) protein (818aa)
conjugal transfer protein TrbE n=1 Tax=Xanthobacteraceae RepID=UPI00037DABF8 rbh
trbE; conjugal transfer ATPase TrbE rbh
ATPase {ECO:0000313|EMBL:BAF89859.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Displaying items 1-30 of 92 in total

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