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S12_scaffold_99_curated

Search features with annotation key words

Displaying items 1-30 of 150 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_99_curated_1
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..762)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034B0482
Amidase {ECO:0000313|EMBL:EIZ04919.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
putative amidase
S12_scaffold_99_curated_2
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(762..2228)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034A96D9 rbh
6-aminohexanoate hydrolase {ECO:0000313|EMBL:KGB82657.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
amidase family protein rbh
S12_scaffold_99_curated_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2225..2671)
DNA (447bp) protein (149aa)
Putative uncharacterized protein npdX n=1 Tax=Arthrobacter sp. JS443 RepID=A7YVV1_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KGT75668.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
protein of unknown function DUF1486
S12_scaffold_99_curated_4
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2768..4252)
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI0003484139 rbh
4-hydroxyphenylacetate 3-monooxygenase {ECO:0000313|EMBL:KGB82658.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
4-hydroxyphenylacetate 3-hydroxylase rbh
S12_scaffold_99_curated_5
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4734..5186)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI00034ADF64
Uncharacterized protein {ECO:0000313|EMBL:CCV12006.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
S12_scaffold_99_curated_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5280..6314
DNA (1035bp) protein (345aa)
Putative ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGS4_MESAW rbh
putative ABC-type transport system, periplasmic component/surface lipoprotein rbh
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:AGB44532.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S12_scaffold_99_curated_7
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6457..8052
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI000369986D rbh
Sugar ABC transporter {ECO:0000313|EMBL:KFI26660.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
ATPase component of uncharacterized ABC-type transporter rbh
S12_scaffold_99_curated_8
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8049..9149
DNA (1101bp) protein (367aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000312AFC5 rbh
ABC transporter permease {ECO:0000313|EMBL:ESY88660.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
ABC-type uncharacterized transport system, permease component rbh
S12_scaffold_99_curated_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9161..10096
DNA (936bp) protein (312aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F972E7 rbh
ABC transporter permease {ECO:0000313|EMBL:EWY39104.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative ABC-type transport system, permease component rbh
S12_scaffold_99_curated_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10117..11292)
DNA (1176bp) protein (392aa)
Pyridoxamine--pyruvate transaminase; EC=2.6.1.30;; Pyridoxamine-pyruvate aminotransferase; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
aminotransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030964C7 rbh
aspartate aminotransferase rbh
S12_scaffold_99_curated_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11697..12446
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI0003495EB0
Uncharacterized protein {ECO:0000313|EMBL:EWY39115.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
S12_scaffold_99_curated_12
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12542..14086
DNA (1545bp) protein (515aa)
Pyridoxine 4-oxidase {ECO:0000313|EMBL:CCV11995.1}; EC=1.1.3.12 {ECO:0000313|EMBL:CCV11995.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Pyridoxine 4-oxidase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6A5_9RHIZ rbh
glucose-methanol-choline oxidoreductase rbh
S12_scaffold_99_curated_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14099..14281)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI0003790EB2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11411.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
S12_scaffold_99_curated_14
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14278..15399)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000367BE35 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11412.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
S12_scaffold_99_curated_15
unknown

Not on your lists

comp(15435..15734)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00037EFAFC
S12_scaffold_99_curated_16
unknown

Not on your lists

15795..16100
DNA (306bp) protein (102aa)

This feature has no annotations

S12_scaffold_99_curated_17
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16113..16580)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00036143E3
Uncharacterized protein {ECO:0000313|EMBL:CCE05746.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
S12_scaffold_99_curated_18
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16625..18658)
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000362FE13 rbh
transcriptional regulator rbh
Putative transcriptional regulatory protein {ECO:0000313|EMBL:KGJ69215.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
S12_scaffold_99_curated_19
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18750..19247)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00038067EC
Uncharacterized protein {ECO:0000313|EMBL:CCE05748.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
S12_scaffold_99_curated_20
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19402..20082)
DNA (681bp) protein (227aa)
UPI0003CDDF9A related cluster n=1 Tax=unknown RepID=UPI0003CDDF9A rbh
Aquaporin {ECO:0000313|EMBL:ESY71622.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
aqpZ; aquaporin Z
S12_scaffold_99_curated_21
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20217..21848)
DNA (1632bp) protein (544aa)
molecular chaperone GroEL n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00036C0D79 rbh
groEL; molecular chaperone GroEL rbh
60 kDa chaperonin {ECO:0000256|RuleBase:RU000419}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
S12_scaffold_99_curated_22
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21915..22784)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000373CB08 rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE05750.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
S12_scaffold_99_curated_23
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22789..23811)
DNA (1023bp) protein (341aa)
amidohydrolase n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000378733F rbh
hypothetical protein rbh
Blr3681 protein {ECO:0000313|EMBL:BAC48946.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
S12_scaffold_99_curated_24
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23924..24295)
DNA (372bp) protein (124aa)
monooxygenase component MmoB/DmpM n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00037F0946
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11420.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
S12_scaffold_99_curated_25
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24301..25371)
DNA (1071bp) protein (357aa)
toluene hydroxylase n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000372AD45 rbh
monooxygenase rbh
Monooxygenase {ECO:0000313|EMBL:BAL11421.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
S12_scaffold_99_curated_26
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25423..26484)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00037E9815 rbh
CDP-6-deoxy-delta-3,4-glucoseen reductase
Oxidoreductase {ECO:0000313|EMBL:BAL11422.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
S12_scaffold_99_curated_27
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26558..28228)
DNA (1671bp) protein (557aa)
Putative methane/phenol/toluene monooxygenase (A subunit, Alpha chain) {ECO:0000313|EMBL:CCE05755.1}; EC=1.14.13.25 {ECO:0000313|EMBL:CCE05755.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
methane monooxygenase n=1 Tax=Ancylobacter sp. FA202 RepID=UPI00035DB98A rbh
methane monooxygenase
S12_scaffold_99_curated_28
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28791..29843)
DNA (1053bp) protein (351aa)
alcohol dehydrogenase (EC:1.1.1.1) rbh
alcohol dehydrogenase n=1 Tax=Ancylobacter sp. FA202 RepID=UPI0003673CFB rbh
Blr3675 protein {ECO:0000313|EMBL:BAC48940.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
S12_scaffold_99_curated_29
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30080..31957
DNA (1878bp) protein (626aa)
hypothetical protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000362E5D1 rbh
sigma-54-dependent transcriptional regulator HTH Fis-type family rbh
Tax=GWB2_Geobacteraceae_52_12_curated
S12_scaffold_99_curated_30
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32312..32518
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036941A2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY45610.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
Displaying items 1-30 of 150 in total

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