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S12_scaffold_102_curated

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Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S12_scaffold_102_curated_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

920..1840
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003657725 rbh
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ABS69413.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_102_curated_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1837..2928
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003799932 rbh
transport system permease rbh
Transport system permease protein {ECO:0000313|EMBL:ABS69414.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_102_curated_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2932..3696
DNA (765bp) protein (255aa)
Hemin import ATP-binding protein HmuV {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041307}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01718, ECO:0000256|SAAS:SAAS00041330};; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037CE9B6 rbh
ABC transporter
S12_scaffold_102_curated_4
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3716..4297)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00038218B0
heme oxygenase
Heme oxygenase {ECO:0000313|EMBL:BAF88038.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_102_curated_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4347..6551)
DNA (2205bp) protein (735aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003611138 rbh
TonB-dependent heme/hemoglobin receptor family protein rbh
TonB-dependent heme/hemoglobin receptor family protein {ECO:0000313|EMBL:ABS69412.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_102_curated_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7177..9381
DNA (2205bp) protein (735aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4E8_STAND rbh
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:ADH89811.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_102_curated_7
unknown

Not on your lists

comp(9488..9589)
DNA (102bp) protein (34aa)

This feature has no annotations

S12_scaffold_102_curated_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9992..10720
DNA (729bp) protein (243aa)
cobalt transporter n=1 Tax=Xanthobacteraceae RepID=UPI000373F1CD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS65678.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_102_curated_9
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10724..12163)
DNA (1440bp) protein (480aa)
Amidase id=2746183 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
amidase
Tax=GWF1_Rhodobacteraceae_65_7_curated
S12_scaffold_102_curated_10
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12346..13692
DNA (1347bp) protein (449aa)
Monooxygenase n=1 Tax=Mycobacterium fortuitum subsp. fortuitum DSM 46621 RepID=K0ULY1_MYCFO rbh
Monooxygenase {ECO:0000313|EMBL:KHJ53333.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
monooxygenase
S12_scaffold_102_curated_11
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13739..14623
DNA (885bp) protein (295aa)
Aliphatic sulfonate ABC transporter permease protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EIP4_NOCAS rbh
ABC transporter permease {ECO:0000313|EMBL:KHJ53332.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
alkanesulfonate ABC transporter permease rbh
S12_scaffold_102_curated_12
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14599..15330
DNA (732bp) protein (244aa)
Putative ABC transporter ATP-binding subunit n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KIW7_STRAM
Sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHJ53331.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
ABC transporter-like protein
S12_scaffold_102_curated_13
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15371..16393
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CEL6_MYCTH rbh
Uncharacterized protein {ECO:0000313|EMBL:KHJ53330.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
S12_scaffold_102_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16412..17869)
DNA (1458bp) protein (486aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AMP nucleosidase (EC:3.2.2.4) rbh
AMP nucleosidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVE7_9RHIZ rbh
S12_scaffold_102_curated_15
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18000..19811
DNA (1812bp) protein (604aa)
Pyrrolo-quinoline quinone n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPG0_XANP2 rbh
Pyrrolo-quinoline quinone rbh
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABS69906.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_102_curated_16
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19840..20928)
DNA (1089bp) protein (363aa)
Choloylglycine hydrolase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IH78_XANP2 rbh
choloylglycine hydrolase rbh
Choloylglycine hydrolase {ECO:0000313|EMBL:ABS67371.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
S12_scaffold_102_curated_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21033..21908)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A076_STAND rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH89337.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
S12_scaffold_102_curated_18
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22033..23424
DNA (1392bp) protein (464aa)
Transcriptional regulatory protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IJE3_AZOC5 rbh
transcriptional regulator rbh
Transcriptional regulatory protein {ECO:0000313|EMBL:BAF86290.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S12_scaffold_102_curated_19
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23518..23916
DNA (399bp) protein (133aa)
Thioesterase superfamily protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IEY9_METNO
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACL61482.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
S12_scaffold_102_curated_20
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23932..25011)
DNA (1080bp) protein (360aa)
Ionotropic glutamate receptor n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIM5_9RHIZ rbh
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:KFC66372.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
extracellular solute-binding protein rbh
S12_scaffold_102_curated_21

Not on your lists

comp(25172..25969)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036143C9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGA16684.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
hypothetical protein
S12_scaffold_102_curated_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26018..27010)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003610049 rbh
ampR; transcriptional regulator protein (activator) rbh
Transcriptional regulator protein (Activator) {ECO:0000313|EMBL:ACM30422.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
S12_scaffold_102_curated_23
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27012..28085)
DNA (1074bp) protein (358aa)
luciferase n=1 Tax=Xanthobacteraceae RepID=UPI000376556C rbh
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:EJK86680.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
luciferase rbh
S12_scaffold_102_curated_24
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28422..29153
DNA (732bp) protein (244aa)
oxidoreductase n=1 Tax=Xanthobacteraceae RepID=UPI000360EB9F rbh
oxidoreductase rbh
Uncharacterized protein {ECO:0000313|EMBL:EJK86679.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
S12_scaffold_102_curated_25
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29189..30271
DNA (1083bp) protein (361aa)
luciferase n=1 Tax=Xanthobacteraceae RepID=UPI00037654F1 rbh
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:EJK86678.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
luciferase rbh
S12_scaffold_102_curated_26
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30379..31614
DNA (1236bp) protein (412aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Ancylobacter sp. FA202 RepID=UPI000372ADF7 rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJK86677.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
branched-chain amino acid ABC transporter substrate-binding protein rbh
S12_scaffold_102_curated_27
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31611..32708
DNA (1098bp) protein (366aa)
amino acid ABC transporter n=1 Tax=Xanthobacteraceae RepID=UPI00036754F8 rbh
braD; amino acid ABC transporter rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJK86676.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
S12_scaffold_102_curated_28
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32713..34386
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003772249 rbh
braE; amino acid ABC transporter rbh
Amino acid ABC transporter {ECO:0000313|EMBL:ACM30416.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
S12_scaffold_102_curated_29
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34379..35239
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003611215 rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJK86674.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
braF; amino acid ABC transporter rbh
S12_scaffold_102_curated_30
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35236..35955
DNA (720bp) protein (240aa)
amino acid ABC transporter ATPase n=1 Tax=Xanthobacteraceae RepID=UPI000370FCD6 rbh
braG; amino acid ABC transporter rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJK86673.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
Displaying items 1-30 of 121 in total

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