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S13_scaffold_34_curated

Search features with annotation key words

Displaying items 1-30 of 204 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_34_curated_1
Lysinibacillus massiliensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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110..1285
DNA (1176bp) protein (392aa)
transposase IS905 n=1 Tax=Bacillus fordii RepID=UPI0003822CDF rbh
Transposase {ECO:0000313|EMBL:KGR79905.1}; TaxID=1211035 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529.;"
transposase, Mutator family rbh
S13_scaffold_34_curated_2
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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1486..2229
DNA (744bp) protein (248aa)
VTC domain-containing protein id=2438743 bin=GWF1_Tenericute_35_14 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
VTC domain-containing protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_3
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

2204..2887
DNA (684bp) protein (228aa)
Putative uncharacterized protein id=3828192 bin=GWC2_Tenericute_34_14 species=Clostridium cellulovorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_trna_10
unknown

Not on your lists

comp(2931..3004)
DNA (74bp)
transferRNA Pro
S13_scaffold_34_curated_4
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(3064..4389)
DNA (1326bp) protein (442aa)
Aminopeptidase C (Bleomycin hydrolase) (EC:3.4.22.40)
Peptidase C1B, bleomycin hydrolase id=2438698 bin=GWF1_Tenericute_35_14 species=human gut metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_5
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(4441..7725)
DNA (3285bp) protein (1095aa)
Putative uncharacterized protein id=4223293 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_6
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(7694..8332)
DNA (639bp) protein (213aa)
Putative uncharacterized protein id=2438692 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_7
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(8329..9711)
DNA (1383bp) protein (461aa)
Putative uncharacterized protein id=2438689 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_8
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(9800..11548)
DNA (1749bp) protein (583aa)
DEAD box ATP-dependent RNA helicase id=2438684 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
srmB; DEAD box ATP-dependent RNA helicase
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_9
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(11629..12276)
DNA (648bp) protein (216aa)
Protein-disulfide isomerase DsbC/DsbG id=2438680 bin=GWF1_Tenericute_35_14 species=Clostridium acetobutylicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Protein-disulfide isomerase DsbC/DsbG
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_10
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(12366..13850)
DNA (1485bp) protein (495aa)
putative metal-dependent hydrolase id=3828207 bin=GWC2_Tenericute_34_14 species=Carnobacterium maltaromaticum genus=Carnobacterium taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good + rbh
ytcJ; putative metal-dependent hydrolase rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_11
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(13909..14661)
DNA (753bp) protein (251aa)
Regulatory protein RecX id=2438674 bin=GWF1_Tenericute_35_14 species=Halobacillus halophilus genus=Halobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_12
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(14663..16168)
DNA (1506bp) protein (502aa)
Carboxyl-terminal protease id=2438670 bin=GWF1_Tenericute_35_14 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
periplasmic protease
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_13
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(16162..17022)
DNA (861bp) protein (287aa)
Integral membrane protein id=3828213 bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good + rbh
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_14
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(17015..18115)
DNA (1101bp) protein (367aa)
Peptide chain release factor 2 id=4357402 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome rbh
prfB; Peptide chain release factor 2
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_15
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(18128..20596)
DNA (2469bp) protein (823aa)
Protein translocase subunit SecA id=4357401 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome rbh
secA; Protein translocase subunit SecA
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_16
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(20798..21364)
DNA (567bp) protein (189aa)
Putative uncharacterized protein id=4357400 bin=GWA2_Tenericute_38_26 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome rbh
transmembrane protein LemA
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_17
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(21380..22282)
DNA (903bp) protein (301aa)
Putative uncharacterized protein id=4357399 bin=GWA2_Tenericute_38_26 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome rbh
probable galanin protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_18
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(22303..23451)
DNA (1149bp) protein (383aa)
S-adenosylmethionine synthetase id=4357398 bin=GWA2_Tenericute_38_26 species=Bacillus coahuilensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome rbh
methionine adenosyltransferase rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_19
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(23701..25011)
DNA (1311bp) protein (437aa)
Hypothetical membrane protein id=4223356 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_20
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(25030..25599)
DNA (570bp) protein (190aa)
pgpA2; Phosphatidylglycerophosphatase A (EC:3.1.3.27)
Phosphatidylglycerophosphatase A id=2438654 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_21
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(25602..26531)
DNA (930bp) protein (310aa)
Methionyl-tRNA formyltransferase id=3828316 bin=GWC2_Tenericute_34_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWC2_Tenericute_34_14 organism_group=Tenericutes organism_desc=Good + rbh
fmt; Methionyl-tRNA formyltransferase
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_22
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(26543..28858)
DNA (2316bp) protein (772aa)
Primosomal protein, replication factor Y id=2438652 bin=GWF1_Tenericute_35_14 species=Candidatus Phytoplasma mali genus=Candidatus Phytoplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
priA; Primosome assembly protein PriA
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_23
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(28910..29251)
DNA (342bp) protein (114aa)
Ribosome-binding factor A id=2438651 bin=GWF1_Tenericute_35_14 species=Candidatus Phytoplasma australiense genus=Candidatus Phytoplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
rbfA; Ribosome-binding factor A
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_24
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(29253..31121)
DNA (1869bp) protein (623aa)
Translation initiation factor IF-2 id=4223364 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
infB; Translation initiation factor IF-2
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_25
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(31126..31416)
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=2438649 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Ribosomal protein L7A family protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_26
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(31409..31681)
DNA (273bp) protein (91aa)
Putative uncharacterized protein id=4223366 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
conserved hypothetical protein (DUF448)
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_27
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(31705..32775)
DNA (1071bp) protein (357aa)
NusA id=4223367 bin=GWF2_Tenericutes_35_184 species=Acholeplasma palmae genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35 rbh
nusA; Transcription termination factor NusA
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_28
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(32785..33255)
DNA (471bp) protein (157aa)
Putative uncharacterized protein id=2438646 bin=GWF1_Tenericute_35_14 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
rimP; Ribosome maturation factor RimP
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_34_curated_29
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

33431..34405
DNA (975bp) protein (325aa)
Periplasmic solute binding protein id=2438606 bin=GWF1_Tenericute_35_14 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF1_Tenericute_35_14 organism_group=Tenericutes rbh
Metal ion ABC transport system, periplasmic component/surface adhesin
Tax=BJP_IG2102_Acholeplasmatales_34_18
Displaying items 1-30 of 204 in total

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