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S13_scaffold_718_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_718_curated_1
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..677
DNA (675bp) protein (225aa)
hypothetical protein id=5079617 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_718_curated_2
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

698..1723
DNA (1026bp) protein (342aa)
hypothetical protein id=5079618 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
mammalian cell entry related domain-containing protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_718_curated_3
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1921..2559
DNA (639bp) protein (213aa)
hypothetical protein id=5079619 bin=GWF1_Burkholderiales_GWF1_66_17 species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_718_curated_4
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2556..2921)
DNA (366bp) protein (122aa)
hypothetical protein id=5079620 bin=GWF1_Burkholderiales_GWF1_66_17 species=Rubrivivax gelatinosus genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
S13_scaffold_718_curated_5
unknown

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comp(3123..4079)
DNA (957bp) protein (319aa)

This feature has no annotations

S13_scaffold_718_curated_6
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4330..5112)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0003031216 rbh
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EZP49578.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
S13_scaffold_718_curated_7
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5308..6282
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002DE2A43 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADX47003.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S13_scaffold_718_curated_8
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6314..7105
DNA (792bp) protein (264aa)
enoyl-CoA hydratase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002F6F43B rbh
enoyl-CoA hydratase/isomerase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADX47002.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S13_scaffold_718_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7111..9231
DNA (2121bp) protein (707aa)
6-carboxyhexanoate--CoA ligase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002F9FE99 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD34853.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
CoA-binding domain-containing protein rbh
S13_scaffold_718_curated_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9242..11296
DNA (2055bp) protein (685aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABM37444.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABM37444.1};; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VP66_POLNA rbh
3-hydroxyacyl-CoA dehydrogenase rbh
S13_scaffold_718_curated_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11299..12579
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002D6D890 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL75518.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
MmgE/PrpD family protein rbh
Displaying 11 items

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