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S13_scaffold_278_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_278_curated_1
unknown

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

S13_scaffold_278_curated_2
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(115..1392)
DNA (1278bp) protein (426aa)
Response regulator receiver protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MQ89_9RHIZ rbh
Response regulator receiver protein {ECO:0000313|EMBL:EKF19472.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
response regulator receiver protein rbh
S13_scaffold_278_curated_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1417..2136)
DNA (720bp) protein (240aa)
Pilus (Caulobacter type) biogenesis lipoprotein CpaD n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11B60_MESSB
pilus biogenesis lipoprotein CpaD
Pilus (Caulobacter type) biogenesis lipoprotein CpaD {ECO:0000313|EMBL:ABG65365.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S13_scaffold_278_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2154..3701)
DNA (1548bp) protein (516aa)
Type II and III secretion system protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJT0_9RHIZ rbh
Type II and III secretion system protein {ECO:0000313|EMBL:EHK58993.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
type II and III secretion system protein rbh
S13_scaffold_278_curated_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3698..4513)
DNA (816bp) protein (272aa)
UPI0003D05FE2 related cluster n=1 Tax=unknown RepID=UPI0003D05FE2 rbh
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:ESZ11837.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
Flp pilus assembly protein CpaB rbh
S13_scaffold_278_curated_6
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4667..5188)
DNA (522bp) protein (174aa)
peptidase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EB1AAD
Peptidase A24A prepilin type IV {ECO:0000313|EMBL:EHH10796.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
type IV prepilin peptidase, cpaA
S13_scaffold_278_curated_7
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5357..5533)
DNA (177bp) protein (59aa)
Fimbriae associated protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BG0_RHILO
fimbriae associated protein
Fimbriae associated protein {ECO:0000313|EMBL:BAB52012.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S13_scaffold_278_curated_8
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5865..6305
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQY1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM71983.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
S13_scaffold_278_curated_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6541..7119
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036479E0
TadE family protein {ECO:0000313|EMBL:EHK58998.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TadE family protein
S13_scaffold_278_curated_10
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7184..7807
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBV1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX16596.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
S13_scaffold_278_curated_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7925..8866)
DNA (942bp) protein (314aa)
Phosphonate ABC transporter periplasmic phosphonate-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBV0_9RHIZ
Phosphonate ABC transporter periplasmic phosphonate-binding protein {ECO:0000313|EMBL:CDX45933.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
phosphonate ABC transporter periplasmic phosphonate-binding protein
S13_scaffold_278_curated_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8971..10209
DNA (1239bp) protein (413aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphopentomutase (EC:5.4.2.7) rbh
Phosphopentomutase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJT7_9RHIZ rbh
S13_scaffold_278_curated_13
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10202..11095
DNA (894bp) protein (298aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18) rbh
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Hoeflea sp. 108 RepID=UPI000374C9D0 rbh
S13_scaffold_278_curated_14
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11141..11914
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ESZ11829.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ESZ11829.1};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
enoyl-CoA hydratase (EC:4.2.1.17) rbh
UPI0003CFC88A related cluster n=1 Tax=unknown RepID=UPI0003CFC88A rbh
S13_scaffold_278_curated_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12128..12394
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EEA3FD
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ribosomal protein S20
S13_scaffold_278_curated_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13229..14764
DNA (1536bp) protein (512aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EGB6_9RHIZ rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
chromosomal replication initiator protein DnaA rbh
S13_scaffold_278_curated_17
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14957..16075
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
DNA polymerase III subunit beta (EC:2.7.7.7) rbh
UPI0003CF70B0 related cluster n=1 Tax=unknown RepID=UPI0003CF70B0 rbh
S13_scaffold_278_curated_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16072..17259
DNA (1188bp) protein (396aa)
UPI0003CFE11A related cluster n=1 Tax=unknown RepID=UPI0003CFE11A rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
DNA replication and repair protein RecF rbh
S13_scaffold_278_curated_19
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17470..17628
DNA (159bp) protein (53aa)
Uncharacterized protein n=5 Tax=Mesorhizobium RepID=V7EUT6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY34738.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
hypothetical protein
S13_scaffold_278_curated_20
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17641..18621)
DNA (981bp) protein (327aa)
Cysteine synthase A n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YHY8_9RHIZ rbh
Cysteine synthase A {ECO:0000313|EMBL:EHH07225.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
cysteine synthase A rbh
S13_scaffold_278_curated_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18801..19802)
DNA (1002bp) protein (334aa)
proline racemase (EC:5.1.1.4) rbh
Proline racemase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKK2_9RHIZ rbh
Proline racemase {ECO:0000313|EMBL:EHK58700.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S13_scaffold_278_curated_22
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19933..20613
DNA (681bp) protein (227aa)
Universal bacterial protein YeaZ n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KB55_MESAW
universal bacterial protein YeaZ
Universal bacterial protein YeaZ {ECO:0000313|EMBL:AGB42542.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S13_scaffold_278_curated_23
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20615..21109
DNA (495bp) protein (165aa)
UPI0003D03219 related cluster n=1 Tax=unknown RepID=UPI0003D03219
ribosomal-protein-alanine acetyltransferase
Alanine acetyltransferase {ECO:0000313|EMBL:ESZ11795.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
S13_scaffold_278_curated_24
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21162..21977
DNA (816bp) protein (272aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FM54_9RHIZ rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:ESZ11796.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein rbh
S13_scaffold_278_curated_25
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21935..23632)
DNA (1698bp) protein (566aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z0D8_9BRAD rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:KFC73913.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor rbh
S13_scaffold_278_curated_26
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24172..26103
DNA (1932bp) protein (644aa)
Methyl-accepting chemotaxis protein McpA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBE6_PHEZH rbh
mcpA; methyl-accepting chemotaxis protein McpA rbh
Methyl-accepting chemotaxis protein McpA {ECO:0000313|EMBL:ACG79791.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
S13_scaffold_278_curated_27
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26248..27639
DNA (1392bp) protein (464aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B4A22 rbh
(dimethylallyl)adenosine tRNA methylthiotransferase rbh
S13_scaffold_278_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27672..28706
DNA (1035bp) protein (345aa)
Phosphate starvation-induced protein phoH n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJY2_9RHIZ rbh
Phosphate starvation-induced protein phoH {ECO:0000313|EMBL:EHK58953.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphate starvation-inducible protein PhoH, predicted ATPase rbh
S13_scaffold_278_curated_29
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28703..29233
DNA (531bp) protein (177aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003D069F6 related cluster n=1 Tax=unknown RepID=UPI0003D069F6
metalloprotein, YbeY/UPF0054 family
S13_scaffold_278_curated_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29244..30329
DNA (1086bp) protein (362aa)
Hemolysin n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJY0_9RHIZ rbh
Hemolysin {ECO:0000313|EMBL:EHK58951.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hemolysin rbh
Displaying items 1-30 of 46 in total

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